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Title :   COMPUTER MODEL OF A COVALENT COMPLEX BETWEEN D(GTGGCGGCGGCC) AND THREE MOLECULES OF ANTITUMOR DRUG ECTEINASCIDIN 743

Authors :   E. Marco, R. Garcia-Nieto, J. Mendieta, I. Manzanares, C. Cuevas, F. Gago

Date :   17 Dec 01 (Deposition) - 21 Dec 01 (Release) - 15 Feb 02 (Revision)

Method :   THEORETICAL MODEL

Resolution :   NOT APPLICABLE

Chains :   Theor. Model : A,B,_^#
( ^#: chains that contain no standard or modified protein/DNA/RNA residue)

Keywords :   Anticancer, Dna, Ecteinascidin, Deoxyribonucleic Acid (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   E. Marco, R. Garcia-Nieto, J. Mendieta, I. Manzanares, C. Cuevas, F. Gago
A 3. (Et743)-Dna Complex That Both Resembles An Rna-Dna Hybrid And Mimicks Zinc Finger-Induced Dna Structural Distortions.
J. Med. Chem. V. 45 871 2002
PubMed: search
(for further references see the PDB file header)

Compounds

*Molecule 1 - 5'-D(GPTPGPGPCPGPGPCPGPGPCPC)-3'*
	Chains	:	A
	Engineered	:	YES
	Other Details	:	THREE COVALENT ADDUCTS BETWEEN ET743 AND DNA
	Synthetic	:	YES

*Molecule 2 - 5'-D(GPGPCPCPGPCPCPGPCPCPAPC)-3'*
	Chains	:	B
	Engineered	:	YES
	Synthetic	:	YES

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 3)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

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SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

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Chain A from PDB  Type:DNA  Length:12
                                           
                  1kml A  1 GTGGCGGCGGCC 12
                                    10

Chain B from PDB  Type:DNA  Length:12
                                           
                  1kml B  1 GGCCGCCGCCAC 12
                                    10

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Classification and Annotation

SCOP Domains (0, 0)

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Pfam Domains (0, 0)

Gene Ontology (0, 0)

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