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(-) Description

Title :  INTERLEUKIN 1BETA-SEA BASS
 
Authors :  S. Costantini, A. Facchiano
Date :  11 Oct 01  (Deposition) - 24 Jun 03  (Release) - 24 Feb 04  (Revision)
Method :  THEORETICAL MODEL
Resolution :  NOT APPLICABLE
Chains :  Theor. Model :  A
Keywords :  Theoretical Model (By Homology Modelling) (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  G. Scapigliati, S. Costantini, G. Colonna, A. Facchiano, F. Buonocore, P. Bossu, C. Cunningham, J. W. Holland, C. J. Secombes
Modelling Of Fish Interleukin-1 And Its Receptor.
Dev. Comp. Immunol. V. 28 429 2004
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - INTERLEUKIN-1 BETA
    Chains: A
    Organism Common: EUROPEAN SEA BASS
    Organism Scientific: DICENTRARCHUS LABRAX L.

 Structural Features

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Summary Information (see also Sequences/Alignments below)

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(-) Sequences/Alignments

Theoretical Model
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:PROTEIN  Length:176
                                                                                                                                                                                                                
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeeeeee....eeeeeee..eeeee....hhhhhh..eeeee..........eeeeeee....eeeeeeee..eeeeeeee.hhhhh.......hhhhheeeeee.....eeeee......eee......ee.eee.........eeeee.................. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1k5l A   1 AQYSKRREVQCSVTDSEKRSLVLVPNSMELHAVMLQGGSDRCKVQLNMSTYLDRTPSAEAQTVALGIKGTNYYLSCHKDGEEPTLHLEVVDKASLANITSDSDMVRFLFYKQDSGLNISTLTSVPFSNWYISTAEENNRPVQMCQESARRHRAFNIDNLKVDPTTEDQVCPLLNGQ 176
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170
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 Related Entries

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(-) Related Entries Specified in the PDB File

1iob MODEL OF HUMAN IL-1BETA- USED AS TEMPLATE FOR HOMOLOGY MODELLING
2mib MODEL OF MOUSE IL-1BETA- USED AS TEMPLATE FOR HOMOLOGY MODELLING