1JRV - JenaLib

Title :   SOLUTION STRUCTURE OF DAATAA DNA BULGE

Authors :   F. A. Gollmick, M. Lorenz, U. Dornberger, J. Von Langen, S. Diekmann, H. Fritzsche

Date :   15 Aug 01 (Deposition) - 19 Jun 02 (Release) - 24 Feb 09 (Revision)

Method :   SOLUTION NMR

Resolution :   NOT APPLICABLE

Chains :   NMR Structure  : A,B  (15x)

Keywords :   Dna Bulge, Five-Nucleotide Bulge Loop, Deoxyribonucleic Acid (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   F. A. Gollmick, M. Lorenz, U. Dornberger, J. Von Langen, S. Diekmann, H. Fritzsche
Solution Structure Of Daataa And Daauaa Dna Bulges.
Nucleic Acids Res. V. 30 2669 2002
PubMed-ID: 12060684 | Reference-DOI: 10.1093/NAR/GKF375
(for further references see the PDB file header)

Compounds

*Molecule 1 - 5'- D(GPCPAPTPCPGPAPAPTPAPAPGPCPTPAPCPG)-3'**
	Chains	:	A
	Engineered	:	YES
	Synthetic	:	YES

*Molecule 2 - 5'-D(CPGPTPAPGPCPCPGPAPTPGPC)-3'*
	Chains	:	B
	Engineered	:	YES
	Synthetic	:	YES

Structural Features

Chains, Units

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Sequences/Alignments

NMR Structure

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Chain A from PDB  Type:DNA  Length:17
                                                
                  1jrv A  1 GCATCGAATAAGCTACG 17
                                    10

Chain B from PDB  Type:DNA  Length:12
                                           
                  1jrv B 18 CGTAGCCGATGC 29
                                    27

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Classification and Annotation

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File

1jrw	1JRW IS THE SOLUTION STRUCTURE OF DAATAA DNA BULGE (MINIMIZED AVERAGE STRUCTURE)
1js5	1JS5 IS THE SOLUTION STRUCTURE OF DAAUAA DNA BULGE (MINIMIZED AVERAGE STRUCTURE)
1js7	1JS7 IS THE SOLUTION STRUCTURE OF DAAUAA DNA BULGE (ENSEMBLE)
1qsk	1QSK CONTAINS A SIMILAR PENTANUCLEOTIDE DNA BULGE WITH AAAAA IN THE BULGE LOOP.

Description