176D - JenaLib

Title :   NMR SOLUTION STRUCTURE OF A PEPTIDE NUCLEIC ACID COMPLEXED WITH RNA

Authors :   S. C. Brown, J. M. Veal

Date :   17 May 94 (Deposition) - 01 Nov 94 (Release) - 13 Jul 11 (Revision)

Method :   SOLUTION NMR

Resolution :   NOT APPLICABLE

Chains :   NMR Structure  : A,B  (10x)
NMR Structure *: A,B  (1x)

Keywords :   Rna, Pna, Double Helix, Peptide Nucleic Acid-Rna Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   S. C. Brown, S. A. Thomson, J. M. Veal, D. G. Davis
Nmr Solution Structure Of A Peptide Nucleic Acid Complexed With Rna.
Science V. 265 777 1994
PubMed-ID: 7519361

Compounds

*Molecule 1 - DNA (5'-D(GPNAPNAPNCPNTPNCPN)-3')*
	Chains	:	A
	Engineered	:	YES
	Other Details	:	CHEMICALLY SYNTHESIZED
	Synthetic	:	YES

*Molecule 2 - RNA (5'-R(PGPAPGPUPUPC)-3')*
	Chains	:	B
	Engineered	:	YES
	Other Details	:	CHEMICALLY SYNTHESIZED
	Synthetic	:	YES

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (4, 6)

NMR Structure (4, 6)

No.	Name	Count	Type	Full Name
1	APN	2	Mod. Nucleotide	2-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-ADENINE
2	CPN	2	Mod. Nucleotide	2-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-CYTOSINE
3	GPN	1	Mod. Nucleotide	2-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-GUANINE
4	TPN	1	Mod. Nucleotide	2-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-THYMINE

NMR Structure * (4, 6)

No.	Name	Count	Type	Full Name
1	APN	2	Mod. Nucleotide	2-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-ADENINE
2	CPN	2	Mod. Nucleotide	2-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-CYTOSINE
3	GPN	1	Mod. Nucleotide	2-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-GUANINE
4	TPN	1	Mod. Nucleotide	2-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-THYMINE

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

NMR Structure

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
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	UniProt sequence: complete aligned part

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Chain A from PDB  Type:DNA  Length:6
                                     
                  176d A  1 gaactc  6
                            ||||||
                            ||||||
                            1-GPN|
                             2-APN
                              3-APN
                               4-CPN
                                5-TPN
                                 6-CPN

Chain B from PDB  Type:RNA  Length:6
                                     
                  176d B  7 GAGUUC 12

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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (0, 0)

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