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 Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:432
 aligned with POLK_HUMAN | Q9UBT6 from UniProtKB/Swiss-Prot  Length:870

    Alignment length:489
                                    42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512         
           POLK_HUMAN    33 KEKINKIIMEATKGSRFYGNELKKEKQVNQRIENMMQQKAQITSQQLRKAQLQVDRFAMELEQSRNLSNTIVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEERQNWPEDKRRYFIKMGSSVENDNPGKEVNKLSEHERSISPLLFEESPSDVQPPGDPFQVNFEEQNNPQILQNSVVFGTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPNRQAVMDFIKDLPIRKVSGIGKVTEKMLKALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGSTHLTRDGERKSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKERLKGRTVTIKLKNVNFEVKTRASTVSSVVSTAEEIFAIAKELLKTEIDADFPHPLRLRLMGVRISSFPNEED 521
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh......eeeeee.hhhhhhhhhhh.......eeee....eee.hhhhhh.......hhhhhhhhh...eee..hhhhhhhhhhhhhhhhhh...........eeeeehhhhhhh.....hhh.eee..---------------------------------------------------------.eee...hhhhhhhhhhhhhhh.....eeeeee.hhhhhhhhhhhh....eee...hhhhhhhhhh...hhhh...hhhhhhhhhh....hhhhhhhhhhhhh...hhhhhhhhhhhhhh..............eeeeeeeeee.hhhhhhhhhhhhhhhhhhhh........eeeeeeee......eeeee......hhhhhhhhhhhhhhhhhhhh......eeeeeeeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------R-------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------UMUC  PDB: A:103-358 UniProt: 103-358                                                                                                                                                                                                                           ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4a    Exon 1.5b  PDB: A:46-85 UniProt: 46-85  Exon 1.7b  PDB: A:86-136 UniProt: 86-136           Exon 1.8b  PDB: A:137-180 UniProt: 137-180  ---------------------------------------------------Exon 1.10a  PDB: A:282-312 UniProt: 232-312 [INCOMPLETE]                         -----------------------------------------Exon 1.12  PDB: A:354-409 UniProt: 354-409              ----------Exon 1.14a  PDB: A:420-452       Exon 1.15a  PDB: A:453-510 UniProt: 453-510               ----------- Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9b  PDB: A:181-224 UniProt: 181-232          -------------------------------------------------------------------------------Exon 1.11  PDB: A:312-353 UniProt: 312-353-------------------------------------------------------Exon 1.13   -----------------------------------------------------------------------------------------Exon 1.16a   Transcript 1 (2)
                 2W7P A  33 KEKINKIIMEATKGSRFYGNELKKEKQVNQRIENMMQQKAQITSQQLRKAQLQVDRFAMELEQSRNLSNTIVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEERQNWPEDKRRYFIK---------------------------------------------------------NSVVFGTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPNRQAVMDFIKDLPIRKVSGIGKVTEKMLKALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGSTHLTRDGERKSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKERLKGRTVTIKLKNVNFEVKTRASTVSSVVSTAEEIFAIAKELLKTEIDADFPHPLRLRLMGVRISSFPNEED 521
                                    42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222 |       -         -         -         -         -       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512         
                                                                                                                                                                                                                         224                                                       282                                                                                                                                                                                                                                               

Chain B from PDB  Type:PROTEIN  Length:431
 aligned with POLK_HUMAN | Q9UBT6 from UniProtKB/Swiss-Prot  Length:870

    Alignment length:489
                                    42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512         
           POLK_HUMAN    33 KEKINKIIMEATKGSRFYGNELKKEKQVNQRIENMMQQKAQITSQQLRKAQLQVDRFAMELEQSRNLSNTIVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEERQNWPEDKRRYFIKMGSSVENDNPGKEVNKLSEHERSISPLLFEESPSDVQPPGDPFQVNFEEQNNPQILQNSVVFGTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPNRQAVMDFIKDLPIRKVSGIGKVTEKMLKALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGSTHLTRDGERKSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKERLKGRTVTIKLKNVNFEVKTRASTVSSVVSTAEEIFAIAKELLKTEIDADFPHPLRLRLMGVRISSFPNEED 521
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) -------------------------------------------------------------------------IMS-2w7pB03 B:106-325                                                                                                                                                                                                       -------------IMS_HHH-2w7pB01 B:339-370       ----------IMS_C-2w7pB05 B:381-510                                                                                                           ----------- Pfam domains (1)
           Pfam domains (2) -------------------------------------------------------------------------IMS-2w7pB04 B:106-325                                                                                                                                                                                                       -------------IMS_HHH-2w7pB02 B:339-370       ----------IMS_C-2w7pB06 B:381-510                                                                                                           ----------- Pfam domains (2)
         Sec.struct. author ..hhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh......eeeeee..hhhhhhhhh..........ee....eee.hhhhhh.......hhhhhhhhh........hhhhhhhhhhhhhhhhhhhh...ee....eeee..hhhhhhh............----------------------------------------------------------.......hhhhhhhhhhhhhhhh....eeeeee.hhhhhhhhhh......eee...hhhhhhhhh...........hhhhhhhhhh....hhhhhhhhhhhhh...hhhhhhhhhhhh...............eeeeeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhh....eeeeeee.........eee......hhhhhhhhhhhhhhhhhhhh......eeeeeeeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------R-------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------UMUC  PDB: B:103-358 UniProt: 103-358                                                                                                                                                                                                                           ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4a    Exon 1.5b  PDB: B:46-85 UniProt: 46-85  Exon 1.7b  PDB: B:86-136 UniProt: 86-136           Exon 1.8b  PDB: B:137-180 UniProt: 137-180  ---------------------------------------------------Exon 1.10a  PDB: B:282-312 UniProt: 232-312 [INCOMPLETE]                         -----------------------------------------Exon 1.12  PDB: B:354-409 UniProt: 354-409              ----------Exon 1.14a  PDB: B:420-452       Exon 1.15a  PDB: B:453-510 UniProt: 453-510               ----------- Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9b  PDB: B:181-223 UniProt: 181-232          -------------------------------------------------------------------------------Exon 1.11  PDB: B:312-353 UniProt: 312-353-------------------------------------------------------Exon 1.13   -----------------------------------------------------------------------------------------Exon 1.16a   Transcript 1 (2)
                 2W7P B  33 KEKINKIIMEATKGSRFYGNELKKEKQVNQRIENMMQQKAQITSQQLRKAQLQVDRFAMELEQSRNLSNTIVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEERQNWPEDKRRYFI----------------------------------------------------------NSVVFGTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPNRQAVMDFIKDLPIRKVSGIGKVTEKMLKALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGSTHLTRDGERKSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKERLKGRTVTIKLKNVNFEVKTRASTVSSVVSTAEEIFAIAKELLKTEIDADFPHPLRLRLMGVRISSFPNEED 521
                                    42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222|        -         -         -         -         -       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512         
                                                                                                                                                                                                                        223                                                        282                                                                                                                                                                                                                                               

Chain E from PDB  Type:DNA  Length:11
                                           
                 2W7P E   3 GGGAAGGATTC  13
                                    12 

Chain F from PDB  Type:DNA  Length:15
                                               
                 2W7P F   2 CACgGAATCCTTCCC  16
                               |    11     
                               5-8OG       

Chain P from PDB  Type:DNA  Length:13
                                             
                 2W7P P   1 GGGGGAAGGATTC  13
                                    10   

Chain T from PDB  Type:DNA  Length:17
                                                 
                 2W7P T   2 CACgGAATCCTTCCCCC  18
                               |    11       
                               5-8OG         

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'