Chain A from PDB Type:PROTEIN Length:432
aligned with POLK_HUMAN | Q9UBT6 from UniProtKB/Swiss-Prot Length:870
Alignment length:489
42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382 392 402 412 422 432 442 452 462 472 482 492 502 512
POLK_HUMAN 33 KEKINKIIMEATKGSRFYGNELKKEKQVNQRIENMMQQKAQITSQQLRKAQLQVDRFAMELEQSRNLSNTIVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEERQNWPEDKRRYFIKMGSSVENDNPGKEVNKLSEHERSISPLLFEESPSDVQPPGDPFQVNFEEQNNPQILQNSVVFGTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPNRQAVMDFIKDLPIRKVSGIGKVTEKMLKALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGSTHLTRDGERKSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKERLKGRTVTIKLKNVNFEVKTRASTVSSVVSTAEEIFAIAKELLKTEIDADFPHPLRLRLMGVRISSFPNEED 521
SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh......eeeeee.hhhhhhhhhhh.......eeee....eee.hhhhhh.......hhhhhhhhh...eee..hhhhhhhhhhhhhhhhhh...........eeeeehhhhhhh.....hhh.eee..---------------------------------------------------------.eee...hhhhhhhhhhhhhhh.....eeeeee.hhhhhhhhhhhh....eee...hhhhhhhhhh...hhhh...hhhhhhhhhh....hhhhhhhhhhhhh...hhhhhhhhhhhhhh..............eeeeeeeeee.hhhhhhhhhhhhhhhhhhhh........eeeeeeee......eeeee......hhhhhhhhhhhhhhhhhhhh......eeeeeeeee....... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------R-------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------UMUC PDB: A:103-358 UniProt: 103-358 ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 (1) Exon 1.4a Exon 1.5b PDB: A:46-85 UniProt: 46-85 Exon 1.7b PDB: A:86-136 UniProt: 86-136 Exon 1.8b PDB: A:137-180 UniProt: 137-180 ---------------------------------------------------Exon 1.10a PDB: A:282-312 UniProt: 232-312 [INCOMPLETE] -----------------------------------------Exon 1.12 PDB: A:354-409 UniProt: 354-409 ----------Exon 1.14a PDB: A:420-452 Exon 1.15a PDB: A:453-510 UniProt: 453-510 ----------- Transcript 1 (1)
Transcript 1 (2) ----------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9b PDB: A:181-224 UniProt: 181-232 -------------------------------------------------------------------------------Exon 1.11 PDB: A:312-353 UniProt: 312-353-------------------------------------------------------Exon 1.13 -----------------------------------------------------------------------------------------Exon 1.16a Transcript 1 (2)
2W7P A 33 KEKINKIIMEATKGSRFYGNELKKEKQVNQRIENMMQQKAQITSQQLRKAQLQVDRFAMELEQSRNLSNTIVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEERQNWPEDKRRYFIK---------------------------------------------------------NSVVFGTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPNRQAVMDFIKDLPIRKVSGIGKVTEKMLKALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGSTHLTRDGERKSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKERLKGRTVTIKLKNVNFEVKTRASTVSSVVSTAEEIFAIAKELLKTEIDADFPHPLRLRLMGVRISSFPNEED 521
42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 | - - - - - 282 292 302 312 322 332 342 352 362 372 382 392 402 412 422 432 442 452 462 472 482 492 502 512
224 282
Chain B from PDB Type:PROTEIN Length:431
aligned with POLK_HUMAN | Q9UBT6 from UniProtKB/Swiss-Prot Length:870
Alignment length:489
42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382 392 402 412 422 432 442 452 462 472 482 492 502 512
POLK_HUMAN 33 KEKINKIIMEATKGSRFYGNELKKEKQVNQRIENMMQQKAQITSQQLRKAQLQVDRFAMELEQSRNLSNTIVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEERQNWPEDKRRYFIKMGSSVENDNPGKEVNKLSEHERSISPLLFEESPSDVQPPGDPFQVNFEEQNNPQILQNSVVFGTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPNRQAVMDFIKDLPIRKVSGIGKVTEKMLKALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGSTHLTRDGERKSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKERLKGRTVTIKLKNVNFEVKTRASTVSSVVSTAEEIFAIAKELLKTEIDADFPHPLRLRLMGVRISSFPNEED 521
SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) -------------------------------------------------------------------------IMS-2w7pB03 B:106-325 -------------IMS_HHH-2w7pB01 B:339-370 ----------IMS_C-2w7pB05 B:381-510 ----------- Pfam domains (1)
Pfam domains (2) -------------------------------------------------------------------------IMS-2w7pB04 B:106-325 -------------IMS_HHH-2w7pB02 B:339-370 ----------IMS_C-2w7pB06 B:381-510 ----------- Pfam domains (2)
Sec.struct. author ..hhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh......eeeeee..hhhhhhhhh..........ee....eee.hhhhhh.......hhhhhhhhh........hhhhhhhhhhhhhhhhhhhh...ee....eeee..hhhhhhh............----------------------------------------------------------.......hhhhhhhhhhhhhhhh....eeeeee.hhhhhhhhhh......eee...hhhhhhhhh...........hhhhhhhhhh....hhhhhhhhhhhhh...hhhhhhhhhhhh...............eeeeeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhh....eeeeeee.........eee......hhhhhhhhhhhhhhhhhhhh......eeeeeeeee....... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------R-------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------UMUC PDB: B:103-358 UniProt: 103-358 ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 (1) Exon 1.4a Exon 1.5b PDB: B:46-85 UniProt: 46-85 Exon 1.7b PDB: B:86-136 UniProt: 86-136 Exon 1.8b PDB: B:137-180 UniProt: 137-180 ---------------------------------------------------Exon 1.10a PDB: B:282-312 UniProt: 232-312 [INCOMPLETE] -----------------------------------------Exon 1.12 PDB: B:354-409 UniProt: 354-409 ----------Exon 1.14a PDB: B:420-452 Exon 1.15a PDB: B:453-510 UniProt: 453-510 ----------- Transcript 1 (1)
Transcript 1 (2) ----------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9b PDB: B:181-223 UniProt: 181-232 -------------------------------------------------------------------------------Exon 1.11 PDB: B:312-353 UniProt: 312-353-------------------------------------------------------Exon 1.13 -----------------------------------------------------------------------------------------Exon 1.16a Transcript 1 (2)
2W7P B 33 KEKINKIIMEATKGSRFYGNELKKEKQVNQRIENMMQQKAQITSQQLRKAQLQVDRFAMELEQSRNLSNTIVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEERQNWPEDKRRYFI----------------------------------------------------------NSVVFGTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPNRQAVMDFIKDLPIRKVSGIGKVTEKMLKALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGSTHLTRDGERKSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKERLKGRTVTIKLKNVNFEVKTRASTVSSVVSTAEEIFAIAKELLKTEIDADFPHPLRLRLMGVRISSFPNEED 521
42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222| - - - - - 282 292 302 312 322 332 342 352 362 372 382 392 402 412 422 432 442 452 462 472 482 492 502 512
223 282
Chain E from PDB Type:DNA Length:11
2W7P E 3 GGGAAGGATTC 13
12
Chain F from PDB Type:DNA Length:15
2W7P F 2 CACgGAATCCTTCCC 16
| 11
5-8OG
Chain P from PDB Type:DNA Length:13
2W7P P 1 GGGGGAAGGATTC 13
10
Chain T from PDB Type:DNA Length:17
2W7P T 2 CACgGAATCCTTCCCCC 18
| 11
5-8OG
| Legend: |
|
→ Mismatch |
(orange background) |
| |
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
| |
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
| |
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
| |
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |
