Chain A from PDB Type:PROTEIN Length:388
aligned with SYWC_HUMAN | P23381 from UniProtKB/Swiss-Prot Length:471
Alignment length:388
471
97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247 257 267 277 287 297 307 317 327 337 347 357 367 377 387 397 407 417 427 437 447 457 467 |
SYWC_HUMAN 88 WTVQTSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDRTDIQCLIPCAIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTDTAKQIKTKVNKHAFSGGRDTIEEHRQFGGNCDVDVSFMYLTFFLEDDDKLEQIRKDYTSGAMLTGELKKALIEVLQPLIAEHQARRKEVTDEIVKEFMTPRKLSFDFQ---- -
SCOP domains d2quja_ A: Tryptophanyl-tRNA synthetase (TrpRS) SCOP domains
CATH domains 2qujA01 A:88-350 Tyrosyl-Transfer RNA Synthetase , subunit E, domain 1 2qujA02 A:351-475 Tyrosyl-Transfer RNA Synthetase CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...........hhhhhhhhhh.ee.hhhhhhhhhhhhh...hhhhhh..eeeeehhhhhhhhhhh...eeeeeee.......hhhhhhhhhhhhhhhhhhh..eeeeehhhhhhhhh..hhhhhhhhhhhhhhhhhh.......eeeeehhhhhhhh.hhhhhhhhhhhh.hhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeee..hhhhhhhhhhhhhhh.....eeeee...ee..eeeee..............hhhhhhhhhhhhh......hhhhhhhhh.....hhhhhhhhhhh.hhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhh.............. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D-------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------AA_TRNA_LIG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 (1) Exon 1.4 -----------------------------------Exon 1.6 PDB: A:141-181 UniProt: 141-181------------------------------------------------------------Exon 1.8 PDB: A:242-276 -------------------------------------Exon 1.10 PDB: A:314-371 UniProt: 314-371 Exon 1.11 PDB: A:372-418 UniProt: 372-418 Exon 1.12b PDB: A:419-471 UniProt: 419-471 ---- Transcript 1 (1)
Transcript 1 (2) -----------------Exon 1.5 PDB: A:105-141 ---------------------------------------Exon 1.7 PDB: A:181-242 UniProt: 181-242 ---------------------------------Exon 1.9 PDB: A:276-313 ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1 (2)
2QUJ A 88 WTVQTSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDRTDIQCLIPCAIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTDTAKQIKTKVNKHAFSGGRDTIEEHRQFGGNCDVDVSFMYLTFFLEDDDKLEQIRKDYTSGAMLTGELKKALIEVLQPLIAEHQARRKEVTDEIVKEFMTPRKLSFDFQHHHH 475
97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247 257 267 277 287 297 307 317 327 337 347 357 367 377 387 397 407 417 427 437 447 457 467
Chain B from PDB Type:PROTEIN Length:378
aligned with SYWC_HUMAN | P23381 from UniProtKB/Swiss-Prot Length:471
Alignment length:378
103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303 313 323 333 343 353 363 373 383 393 403 413 423 433 443 453 463
SYWC_HUMAN 94 SAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDRTDIQCLIPCAIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTDTAKQIKTKVNKHAFSGGRDTIEEHRQFGGNCDVDVSFMYLTFFLEDDDKLEQIRKDYTSGAMLTGELKKALIEVLQPLIAEHQARRKEVTDEIVKEFMTPRKLSFDFQ 471
SCOP domains d2qujb_ B: Tryptophanyl-tRNA synthetase (TrpRS) SCOP domains
CATH domains 2qujB01 B:94-350 Tyrosyl-Transfer RNA Synthetase , subunit E, domain 1 2qujB02 B:351-471 Tyrosyl-Transfer RNA Synthetase CATH domains
Pfam domains (1) ---------------------------------------------------------tRNA-synt_1b-2qujB01 B:151-443 ---------------------------- Pfam domains (1)
Pfam domains (2) ---------------------------------------------------------tRNA-synt_1b-2qujB02 B:151-443 ---------------------------- Pfam domains (2)
Sec.struct. author .....hhhhhhhhhh.ee.hhhhhhhhhhhhh...hhhhhh..eeeeehhhhhhhhhhh...eeeeeee.......hhhhhhhhhhhhhhhhhhh..eeeeehhhhhhhhh..hhhhhhhhhhhhhhhhhh.......eeeeehhhhhh...hhhhhhhhhhhh.hhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhh..........eeeeeee..hhhhhhhhhhhhhhh.....eeeee...ee..eeeee....hhhhh.....hhhhhhhhhhhhh......hhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D---------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------AA_TRNA_LIG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 (1) Exon 1.4 -----------------------------------Exon 1.6 PDB: B:141-181 UniProt: 141-181------------------------------------------------------------Exon 1.8 PDB: B:242-276 -------------------------------------Exon 1.10 PDB: B:314-371 UniProt: 314-371 Exon 1.11 PDB: B:372-418 UniProt: 372-418 Exon 1.12b PDB: B:419-471 UniProt: 419-471 Transcript 1 (1)
Transcript 1 (2) -----------Exon 1.5 PDB: B:105-141 ---------------------------------------Exon 1.7 PDB: B:181-242 UniProt: 181-242 ---------------------------------Exon 1.9 PDB: B:276-313 -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
2QUJ B 94 SAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDRTDIQCLIPCAIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTDTAKQIKTKVNKHAFSGGRDTIEEHRQFGGNCDVDVSFMYLTFFLEDDDKLEQIRKDYTSGAMLTGELKKALIEVLQPLIAEHQARRKEVTDEIVKEFMTPRKLSFDFQ 471
103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303 313 323 333 343 353 363 373 383 393 403 413 423 433 443 453 463
| Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |
