Chain A from PDB Type:PROTEIN Length:269
aligned with LACI_ECOLI | P03023 from UniProtKB/Swiss-Prot Length:360
Alignment length:269
71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321
LACI_ECOLI 62 LLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTL 330
SCOP domains d2pafa1 A:62-330 Lac-repressor (lacR) core (C-terminal domain) SCOP domains
CATH domains 2pafA01 A:62-161,A:291-320 [code=3.40.50.2300, no name defined] 2pafA02 A:162-290,A:321-330 [code=3.40.50.2300, no name defined] 2pafA01 A:62-161,A:291-320 2pafA02 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeee...hhhhhhhhhhhhhhhhhhh.eeeeeee....hhhhhh...........eeeee...hhhhhhhhhhhhh...eee..............hhhhhhhhhhhhhhhhh...eeee.....hhhhhhhhhhhhhhhhhh......ee....hhhhhhhhhhhhhhhhh...eeee.hhhhhhhhhhhhhhh........eee....hhhhhhh.....eee.hhhhhhhhhhhhhhhhh.............eee...... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D------------------------------------------------ SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2PAF A 62 LLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTL 330
71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321
Chain B from PDB Type:PROTEIN Length:269
aligned with LACI_ECOLI | P03023 from UniProtKB/Swiss-Prot Length:360
Alignment length:269
71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321
LACI_ECOLI 62 LLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTL 330
SCOP domains d2pafb1 B:62-330 Lac-repressor (lacR) core (C-terminal domain) SCOP domains
CATH domains 2pafB01 B:62-161,B:291-320 [code=3.40.50.2300, no name defined] 2pafB02 B:162-290,B:321-330 [code=3.40.50.2300, no name defined] 2pafB01 B:62-161,B:291-320 2pafB02 CATH domains
Pfam domains (1) -------------------------------------------------------------------------------------------------------------Peripla_BP_3-2pafB01 B:171-329 - Pfam domains (1)
Pfam domains (2) -------------------------------------------------------------------------------------------------------------Peripla_BP_3-2pafB02 B:171-329 - Pfam domains (2)
Sec.struct. author .eeeeee....hhhhhhhhhhhhhhhhhhh.eeeeee....hhhhhhhhhhhhhh....eeeee...hhhhhhhhhhhh....eee..........eeeehhhhhhhhhhhhhhh.....eeeee....hhhhhhhhhhhhhhhhh.......eee...hhhhhhhhhhhhhhhh....eeee.hhhhhhhhhhhhhhh........eee....hhhhhhh.....eee.hhhhhhhhhhhhhhhhhhh.....eeee..eee...... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D------------------------------------------------ SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2PAF B 62 LLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTL 330
71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321
| Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
| |
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |
