Chain A from PDB Type:PROTEIN Length:168
aligned with CASP1_HUMAN | P29466 from UniProtKB/Swiss-Prot Length:404
Alignment length:173
134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294
CASP1_HUMAN 125 TSSGSEGNVKLCSLEEAQRIWKQKSAEIYPIMDKSSRTRLALIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYSVDVKKNLTASDMTTELEAFAHRPEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLNTKNCPSLKDKPKVIIIQACRGDSPGVVWFKD 297
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ............hhhhhhhh-----..............eeeeee...........hhhhhhhhhhhhhhhh..eeeeee..hhhhhhhhhhhhhhhhhhhhh..eeeeee..ee..eee..........eehhhhhhhhhh...hhhhh...eeeeee.............. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ------------------------------------CASPASE_P20 PDB: A:161-289 UniProt: 161-289 -------- PROSITE (1)
PROSITE (2) ---------------------------------------------------------------------------------------------------CASPASE_HIS -------------------------------------CASPASE_CYS ---------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2HBQ A 125 TSSGSEGNVKLCSLEEAQRI-----AEIYPIMDKSSRTRLALIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYSVDVKKNLTASDMTTELEAFAHRPEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLNTKNCPSLKDKPKVIIIQACRGDSPGVVWFKD 297
134 144 | 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294
144 150
Chain B from PDB Type:PROTEIN Length:88
aligned with CASP1_HUMAN | P29466 from UniProtKB/Swiss-Prot Length:404
Alignment length:88
326 336 346 356 366 376 386 396
CASP1_HUMAN 317 AIKKAHIEKDFIAFCSSTPDNVSWRHPTMGSVFIGRLIEHMQEYACSCDVEEIFRKVRFSFEQPDGRAQMPTTERVTLTRCFYLFPGH 404
SCOP domains ---------------------------------------------------------------------------------------- SCOP domains
CATH domains ---------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..........eeeee.........ee...eehhhhhhhhhhhhhh...hhhhhhhhhhhhh..........eee.............. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) CASPASE_P10 PDB: B:317-402 UniProt: 317-402 -- PROSITE (1)
PROSITE (2) ---------------------------------------------------------------------------------------- PROSITE (2)
Transcript ---------------------------------------------------------------------------------------- Transcript
2HBQ B 317 AIKKAHIEKDFIAFCSSTPDNVSWRHPTMGSVFIGRLIEHMQEYACSCDVEEIFRKVRFSFEQPDGRAQMPTTERVTLTRCFYLFPGH 404
326 336 346 356 366 376 386 396
Chain C from PDB Type:PROTEIN Length:5
SCOP domains ----- SCOP domains
CATH domains ----- CATH domains
Pfam domains ----- Pfam domains
Sec.struct. author ..... Sec.struct. author
SAPs(SNPs) ----- SAPs(SNPs)
PROSITE ----- PROSITE
Transcript ----- Transcript
2HBQ C 1 xVADx 5
| |
1-PHQ
5-CF0
Legend: |
|
→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |