Chain A from PDB Type:PROTEIN Length:73
aligned with TIM9_HUMAN | Q9Y5J7 from UniProtKB/Swiss-Prot Length:89
Alignment length:73
22 32 42 52 62 72 82
TIM9_HUMAN 13 QFKEFLGTYNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMTQRISMRFQEYHIQQNEALAAKAGLL 85
SCOP domains d2bska1 A:13-85 SCOP domains
CATH domains ------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhh... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------- PROSITE
Transcript 2 2Exon 2.5 PDB: A:14-45 Exon 2.6b PDB: A:46-85 UniProt: 46-89 Transcript 2
2BSK A 13 QFKEFLGTYNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMTQRISMRFQEYHIQQNEALAAKAGLL 85
22 32 42 52 62 72 82
Chain B from PDB Type:PROTEIN Length:65
aligned with TIM10_HUMAN | P62072 from UniProtKB/Swiss-Prot Length:90
Alignment length:65
22 32 42 52 62 72
TIM10_HUMAN 13 LEVEMMADMYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLDIHERMGKKLTELSMQDE 77
SCOP domains d2bskb1 B:13-77 SCOP domains
CATH domains ----------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------- Pfam domains
Sec.struct. author .....hhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------- PROSITE
Transcript 1 (1) Exon 1.2b ----------------------------------------------------- Transcript 1 (1)
Transcript 1 (2) -----------Exon 1.3c PDB: B:24-77 UniProt: 24-90 [INCOMPLETE] Transcript 1 (2)
2BSK B 13 LEVEmmADmYNRmTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLDIHERmGKKLTELSmQDE 77
|| 22 | 32 42 52 62 | 72 |
|| | | 65-MSE 74-MSE
17-MSE |
18-MSE |
21-MSE
25-MSE
Chain C from PDB Type:PROTEIN Length:79
aligned with TIM9_HUMAN | Q9Y5J7 from UniProtKB/Swiss-Prot Length:89
Alignment length:79
18 28 38 48 58 68 78
TIM9_HUMAN 9 DQIKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMTQRISMRFQEYHIQQNEALAAKAGLLGQ 87
SCOP domains ----d2bskc1 C:13-85 -- SCOP domains
CATH domains ------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh........ Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------- PROSITE
Transcript 2 2.4b Exon 2.5 PDB: C:14-45 Exon 2.6b PDB: C:46-87 UniProt: 46-89 Transcript 2
2BSK C 9 DQIKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMTQRISMRFQEYHIQQNEALAAKAGLLGQ 87
18 28 38 48 58 68 78
Chain D from PDB Type:PROTEIN Length:90
aligned with TIM10_HUMAN | P62072 from UniProtKB/Swiss-Prot Length:90
Alignment length:90
10 20 30 40 50 60 70 80 90
TIM10_HUMAN 1 MDPLRAQQLAAELEVEMMADMYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLDIHERMGKKLTELSMQDEELMKRVQQSSGPA 90
SCOP domains ------------d2bskd1 D:13-77 ------------- SCOP domains
CATH domains ------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhh... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------ PROSITE
Transcript 1 (1) Exon 1.2b PDB: D:1-24 ------------------------------------------------------------------ Transcript 1 (1)
Transcript 1 (2) -----------------------Exon 1.3c PDB: D:24-90 UniProt: 24-90 Transcript 1 (2)
2BSK D 1 mDPLRAQQLAAELEVEmmADmYNRmTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLDIHERmGKKLTELSmQDEELmKRVQQSSGPA 90
| 10 ||20| | 30 40 50 60 | 70 | 80 90
| 17-MSE | 65-MSE 74-MSE |
1-MSE 18-MSE | 80-MSE
21-MSE
25-MSE
Chain E from PDB Type:PROTEIN Length:63
aligned with TIM9_HUMAN | Q9Y5J7 from UniProtKB/Swiss-Prot Length:89
Alignment length:63
22 32 42 52 62 72
TIM9_HUMAN 13 QFKEFLGTYNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMTQRISMRFQEYHIQQN 75
SCOP domains --------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------- PROSITE
Transcript 2 2Exon 2.5 PDB: E:14-45 Exon 2.6b PDB: E:46-75 Transcript 2
2BSK E 13 QFKEFLGTYNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMTQRISMRFQEYHIQQN 75
22 32 42 52 62 72
Chain F from PDB Type:PROTEIN Length:64
aligned with TIM10_HUMAN | P62072 from UniProtKB/Swiss-Prot Length:90
Alignment length:64
19 29 39 49 59 69
TIM10_HUMAN 10 AAELEVEMMADMYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLDIHERMGKKLTELS 73
SCOP domains ---d2bskf1 F:13-73 SCOP domains
CATH domains ---------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------- PROSITE
Transcript 1 (1) Exon 1.2b ------------------------------------------------- Transcript 1 (1)
Transcript 1 (2) --------------Exon 1.3c PDB: F:24-73 UniProt: 24-90 Transcript 1 (2)
2BSK F 10 AAELEVEmmADmYNRmTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLDIHERmGKKLTELS 73
|19 | | 29 39 49 59 | 69
17-MSE | 65-MSE
18-MSE |
21-MSE
25-MSE
| Legend: |
|
→ Mismatch |
(orange background) |
| |
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
| |
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
| |
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
| |
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |
