Chain A from PDB Type:PROTEIN Length:158
aligned with Q4Q5L3_LEIMA | Q4Q5L3 from UniProtKB/TrEMBL Length:234
Alignment length:158
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158
Q4Q5L3_LEIMA 9 SNRRREMDYMRLCNSTRKVYPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDERSGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHATPQKALESIPEAYRP 166
SCOP domains d1yf9a1 A:13-170 Ubiquitin conjugating enzyme, UBC SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhh....eee.....eeeeeee..........eeeeeee..........eeee................hhhhhhhhh.....hhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1YF9 A 13 SNRRREMDYMRLCNSTRKVYPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDERSGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHATPQKALESIPEAYRP 170
22 32 42 52 62 72 82 92 102 112 122 132 142 152 162
Chain B from PDB Type:PROTEIN Length:160
aligned with Q4Q5L3_LEIMA | Q4Q5L3 from UniProtKB/TrEMBL Length:234
Alignment length:160
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166
Q4Q5L3_LEIMA 7 LRSNRRREMDYMRLCNSTRKVYPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDERSGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHATPQKALESIPEAYRP 166
SCOP domains d1yf9b_ B: automated matches SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhh....eee.....eeeeeee..........eeeeeee..........eeee................hhhhhhhhh....hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1YF9 B 11 LRSNRRREMDYMRLCNSTRKVYPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDERSGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHATPQKALESIPEAYRP 170
20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170
Chain C from PDB Type:PROTEIN Length:159
aligned with Q4Q5L3_LEIMA | Q4Q5L3 from UniProtKB/TrEMBL Length:234
Alignment length:159
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158
Q4Q5L3_LEIMA 9 SNRRREMDYMRLCNSTRKVYPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDERSGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHATPQKALESIPEAYRPH 167
SCOP domains d1yf9c_ C: automated matches SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) -UQ_con-1yf9C01 C:14-151 -------------------- Pfam domains (1)
Pfam domains (2) -UQ_con-1yf9C02 C:14-151 -------------------- Pfam domains (2)
Pfam domains (3) -UQ_con-1yf9C03 C:14-151 -------------------- Pfam domains (3)
Sec.struct. author .hhhhhhhhhhhhh....eee.....eeeeeee..........eeeeeee..........eeee................hhhhhhhhh.....hhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1YF9 C 13 SNRRREMDYMRLCNSTRKVYPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDERSGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHATPQKALESIPEAYRPH 171
22 32 42 52 62 72 82 92 102 112 122 132 142 152 162
| Legend: |
|
→ Mismatch |
(orange background) |
| |
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
| |
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
| |
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
| |
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |
