Chain C from PDB Type:DNA Length:17
1TQE C 1 AAAGCTATTTATAAGCA 17
10
Chain D from PDB Type:DNA Length:17
1TQE D 1 TTGCTTATAAATAGCTT 17
10
Chain E from PDB Type:DNA Length:17
1TQE E 1 AAAGCTATTTATAAGCA 17
10
Chain F from PDB Type:DNA Length:17
1TQE F 1 TTGCTTATAAATAGCTT 17
10
Chain P from PDB Type:PROTEIN Length:90
aligned with MEF2B_HUMAN | Q02080 from UniProtKB/Swiss-Prot Length:365
Alignment length:90
11 21 31 41 51 61 71 81 91
MEF2B_HUMAN 2 GRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYASTDMDRVLLKYTEYSEPHESRTNTDILETLKRR 91
SCOP domains d1tqep_ P: Myocyte enhancer factor Mef2b core SCOP domains
CATH domains ------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .............hhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeee.....eeeee..hhhhhhhhhhhh.......hhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE -MADS_BOX_1 PDB: P:3-57 UniProt: 3-57 ---------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------ Transcript
1TQE P 2 GRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYASTDMDRVLLKYTEYSEPHESRTNTDILETLKRR 91
11 21 31 41 51 61 71 81 91
Chain Q from PDB Type:PROTEIN Length:90
aligned with MEF2B_HUMAN | Q02080 from UniProtKB/Swiss-Prot Length:365
Alignment length:90
11 21 31 41 51 61 71 81 91
MEF2B_HUMAN 2 GRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYASTDMDRVLLKYTEYSEPHESRTNTDILETLKRR 91
SCOP domains d1tqeq_ Q: Myocyte enhancer factor Mef2b core SCOP domains
CATH domains ------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .............hhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeee.....eeeee..hhhhhhhhhhh.....eeehhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE -MADS_BOX_1 PDB: Q:3-57 UniProt: 3-57 ---------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------ Transcript
1TQE Q 2 GRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYASTDMDRVLLKYTEYSEPHESRTNTDILETLKRR 91
11 21 31 41 51 61 71 81 91
Chain R from PDB Type:PROTEIN Length:90
aligned with MEF2B_HUMAN | Q02080 from UniProtKB/Swiss-Prot Length:365
Alignment length:90
11 21 31 41 51 61 71 81 91
MEF2B_HUMAN 2 GRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYASTDMDRVLLKYTEYSEPHESRTNTDILETLKRR 91
SCOP domains d1tqer_ R: Myocyte enhancer factor Mef2b core SCOP domains
CATH domains ------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .............hhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeee.....eeeee..hhhhhhhhhhhh.......hhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE -MADS_BOX_1 PDB: R:3-57 UniProt: 3-57 ---------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------ Transcript
1TQE R 2 GRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYASTDMDRVLLKYTEYSEPHESRTNTDILETLKRR 91
11 21 31 41 51 61 71 81 91
Chain S from PDB Type:PROTEIN Length:90
aligned with MEF2B_HUMAN | Q02080 from UniProtKB/Swiss-Prot Length:365
Alignment length:90
11 21 31 41 51 61 71 81 91
MEF2B_HUMAN 2 GRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYASTDMDRVLLKYTEYSEPHESRTNTDILETLKRR 91
SCOP domains d1tqes_ S: Myocyte enhancer factor Mef2b core SCOP domains
CATH domains ------------------------------------------------------------------------------------------ CATH domains
Pfam domains (1) -------SRF-TF-1tqeS01 S:9-59 -------------------------------- Pfam domains (1)
Pfam domains (2) -------SRF-TF-1tqeS02 S:9-59 -------------------------------- Pfam domains (2)
Pfam domains (3) -------SRF-TF-1tqeS03 S:9-59 -------------------------------- Pfam domains (3)
Pfam domains (4) -------SRF-TF-1tqeS04 S:9-59 -------------------------------- Pfam domains (4)
Sec.struct. author .............hhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeee.....eeeee..hhhhhhhhhhh.....eeeehhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE -MADS_BOX_1 PDB: S:3-57 UniProt: 3-57 ---------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------ Transcript
1TQE S 2 GRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYASTDMDRVLLKYTEYSEPHESRTNTDILETLKRR 91
11 21 31 41 51 61 71 81 91
Chain X from PDB Type:PROTEIN Length:23
aligned with HDAC9_MOUSE | Q99N13 from UniProtKB/Swiss-Prot Length:588
Alignment length:31
134 144 154
HDAC9_MOUSE 125 PPLRGKDRGRERAVASTEVKQKLQEFLLSKS 155
SCOP domains ------------------------------- SCOP domains
CATH domains ------------------------------- CATH domains
Pfam domains ------------------------------- Pfam domains
Sec.struct. author ..---....-----...hhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------- SAPs(SNPs)
PROSITE ------------------------------- PROSITE
Transcript ------------------------------- Transcript
1TQE X 103 SP---KGTG-----ASTEVKQKLQEFLLSKS 125
| | |- | 114 124
| 105 | 109
104 108
Chain Y from PDB Type:PROTEIN Length:23
aligned with HDAC9_MOUSE | Q99N13 from UniProtKB/Swiss-Prot Length:588
Alignment length:31
134 144 154
HDAC9_MOUSE 125 PPLRGKDRGRERAVASTEVKQKLQEFLLSKS 155
SCOP domains ------------------------------- SCOP domains
CATH domains ------------------------------- CATH domains
Pfam domains ------------------------------- Pfam domains
Sec.struct. author ..---....-----...hhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------- SAPs(SNPs)
PROSITE ------------------------------- PROSITE
Transcript ------------------------------- Transcript
1TQE Y 103 SP---KGTG-----ASTEVKQKLQEFLLSKS 125
| | |- | 114 124
104 105 | 109
108
| Legend: |
|
→ Mismatch |
(orange background) |
| |
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
| |
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
| |
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
| |
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |
