Chain A from PDB Type:PROTEIN Length:198
aligned with SODM_HUMAN | P04179 from UniProtKB/Swiss-Prot Length:222
Alignment length:198
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214
SODM_HUMAN 25 KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERYMACKK 222
SCOP domains d1pl4a1 A:1-83 Mn superoxide dismutase (MnSOD) d1pl4a2 A:84-198 Mn superoxide dismutase (MnSOD) SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeeeeee....eeeeeeee...hhhhhhh.eeeeeee.hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) -----------------------------------------V---------R-----T-------------------------------------------------------------------------W------------------------------------------------------------------ SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------SOD_MN -------------------------------- PROSITE
Transcript 1 (1) Exon 1.2a PDB: A:1-52 UniProt: 8-76 [INCOMPLETE] --------------------------------------Exon 1.4 PDB: A:91-151 UniProt: 115-175 ----------------------------------------------- Transcript 1 (1)
Transcript 1 (2) ---------------------------------------------------Exon 1.3 PDB: A:52-91 UniProt: 76-115 -----------------------------------------------------------Exon 1.5a PDB: A:151-198 UniProt: 175-222 Transcript 1 (2)
1PL4 A 1 KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYFLQYKNVRPDYLKAIWNVINWENVTERYMACKK 198
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190
Chain B from PDB Type:PROTEIN Length:196
aligned with SODM_HUMAN | P04179 from UniProtKB/Swiss-Prot Length:222
Alignment length:196
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214
SODM_HUMAN 25 KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERYMAC 220
SCOP domains d1pl4b1 B:1-83 Mn superoxide dismutase (MnSOD) d1pl4b2 B:84-196 Mn superoxide dismutase (MnSOD) SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeeeeee....eeeeeeee...hhhhhhh.eeeeeee.hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) -----------------------------------------V---------R-----T-------------------------------------------------------------------------W---------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------SOD_MN ------------------------------ PROSITE
Transcript 1 (1) Exon 1.2a PDB: B:1-52 UniProt: 8-76 [INCOMPLETE] --------------------------------------Exon 1.4 PDB: B:91-151 UniProt: 115-175 --------------------------------------------- Transcript 1 (1)
Transcript 1 (2) ---------------------------------------------------Exon 1.3 PDB: B:52-91 UniProt: 76-115 -----------------------------------------------------------Exon 1.5a PDB: B:151-196 UniProt: 175-222 Transcript 1 (2)
1PL4 B 1 KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYFLQYKNVRPDYLKAIWNVINWENVTERYMAC 196
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190
Chain C from PDB Type:PROTEIN Length:197
aligned with SODM_HUMAN | P04179 from UniProtKB/Swiss-Prot Length:222
Alignment length:197
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214
SODM_HUMAN 25 KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERYMACK 221
SCOP domains d1pl4c1 C:1-83 Mn superoxide dismutase (MnSOD) d1pl4c2 C:84-197 Mn superoxide dismutase (MnSOD) SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeeeeee....eeeeeeee...hhhhhhh.eeeeeee.hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) -----------------------------------------V---------R-----T-------------------------------------------------------------------------W----------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------SOD_MN ------------------------------- PROSITE
Transcript 1 (1) Exon 1.2a PDB: C:1-52 UniProt: 8-76 [INCOMPLETE] --------------------------------------Exon 1.4 PDB: C:91-151 UniProt: 115-175 ---------------------------------------------- Transcript 1 (1)
Transcript 1 (2) ---------------------------------------------------Exon 1.3 PDB: C:52-91 UniProt: 76-115 -----------------------------------------------------------Exon 1.5a PDB: C:151-197 UniProt: 175-222 Transcript 1 (2)
1PL4 C 1 KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYFLQYKNVRPDYLKAIWNVINWENVTERYMACK 197
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190
Chain D from PDB Type:PROTEIN Length:197
aligned with SODM_HUMAN | P04179 from UniProtKB/Swiss-Prot Length:222
Alignment length:197
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214
SODM_HUMAN 25 KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERYMACK 221
SCOP domains d1pl4d1 D:1-83 Mn superoxide dismutase (MnSOD) d1pl4d2 D:84-197 Mn superoxide dismutase (MnSOD) SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) Sod_Fe_N-1pl4D05 D:1-82 ----Sod_Fe_C-1pl4D01 D:87-193 ---- Pfam domains (1)
Pfam domains (2) Sod_Fe_N-1pl4D06 D:1-82 ----Sod_Fe_C-1pl4D02 D:87-193 ---- Pfam domains (2)
Pfam domains (3) Sod_Fe_N-1pl4D07 D:1-82 ----Sod_Fe_C-1pl4D03 D:87-193 ---- Pfam domains (3)
Pfam domains (4) Sod_Fe_N-1pl4D08 D:1-82 ----Sod_Fe_C-1pl4D04 D:87-193 ---- Pfam domains (4)
Sec.struct. author ..................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeeeeee....eeeeeeee...hhhhhhh.eeeeeee.hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) -----------------------------------------V---------R-----T-------------------------------------------------------------------------W----------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------SOD_MN ------------------------------- PROSITE
Transcript 1 (1) Exon 1.2a PDB: D:1-52 UniProt: 8-76 [INCOMPLETE] --------------------------------------Exon 1.4 PDB: D:91-151 UniProt: 115-175 ---------------------------------------------- Transcript 1 (1)
Transcript 1 (2) ---------------------------------------------------Exon 1.3 PDB: D:52-91 UniProt: 76-115 -----------------------------------------------------------Exon 1.5a PDB: D:151-197 UniProt: 175-222 Transcript 1 (2)
1PL4 D 1 KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYFLQYKNVRPDYLKAIWNVINWENVTERYMACK 197
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190
| Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
| |
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |
