Chain A from PDB Type:PROTEIN Length:213
aligned with Q7MHK3_VIBVY | Q7MHK3 from UniProtKB/TrEMBL Length:231
Alignment length:213
28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228
Q7MHK3_VIBVY 19 APPSSFSAAKQQAVKIYQDHPISFYCGCDIEWQGKKGIPNLETCGYQVRKQQTRASRIEWEHVVPAWQFGHHRQCWQKGGRKNCSKNDQQFRLMEADLHNLTPAIGEVNGDRSNFNFSQWNGVDGVSYGRCEMQVNFKQRKVMPPDRARGSIARTYLYMSQEYGFQLSKQQQQLMQAWNKSYPVDEWECTRDDRIAKIQGNHNPFVQQSCQTQ 231
SCOP domains d1oupa_ A: Periplasmic endonuclease Vvn SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhhhh............eeee..eeee...........hhhhhh.eeeee..hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeehhhhhhhh..ee........eee..eeeeee....eee.hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh..hhhhhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1OUP A 19 APPSSFSAAKQQAVKIYQDHPISFYCGCDIEWQGKKGIPNLETCGYQVRKQQTRASRIEWEAVVPAWQFGHHRQCWQKGGRKNCSKNDQQFRLMEADLHNLTPAIGEVNGDRSNFNFSQWNGVDGVSYGRCEMQVNFKQRKVMPPDRARGSIARTYLYMSQEYGFQLSKQQQQLMQAWNKSYPVDEWECTRDDRIAKIQGNHNPFVQQSCQTQ 231
28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228
Chain B from PDB Type:PROTEIN Length:210
aligned with Q7MHK3_VIBVY | Q7MHK3 from UniProtKB/TrEMBL Length:231
Alignment length:210
28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228
Q7MHK3_VIBVY 19 APPSSFSAAKQQAVKIYQDHPISFYCGCDIEWQGKKGIPNLETCGYQVRKQQTRASRIEWEHVVPAWQFGHHRQCWQKGGRKNCSKNDQQFRLMEADLHNLTPAIGEVNGDRSNFNFSQWNGVDGVSYGRCEMQVNFKQRKVMPPDRARGSIARTYLYMSQEYGFQLSKQQQQLMQAWNKSYPVDEWECTRDDRIAKIQGNHNPFVQQSC 228
SCOP domains d1oupb_ B: Periplasmic endonuclease Vvn SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains (1) Endonuclease_1-1oupB01 B:19-228 Pfam domains (1)
Pfam domains (2) Endonuclease_1-1oupB02 B:19-228 Pfam domains (2)
Sec.struct. author ....hhhhhhhhhhhhh............ee......ee...........hhhhhh.eeeee..hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh...eeeeehhhhhhhh..ee........eee..eeeeee....eee.hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh..hhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1OUP B 19 APPSSFSAAKQQAVKIYQDHPISFYCGCDIEWQGKKGIPNLETCGYQVRKQQTRASRIEWEAVVPAWQFGHHRQCWQKGGRKNCSKNDQQFRLMEADLHNLTPAIGEVNGDRSNFNFSQWNGVDGVSYGRCEMQVNFKQRKVMPPDRARGSIARTYLYMSQEYGFQLSKQQQQLMQAWNKSYPVDEWECTRDDRIAKIQGNHNPFVQQSC 228
28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228
Chain C from PDB Type:DNA Length:8
1OUP C 1 GCGATCGC 8
Chain D from PDB Type:DNA Length:8
1OUP D 9 GCGATCGC 16
Chain E from PDB Type:DNA Length:6
1OUP E 1 GCGATC 6
Chain F from PDB Type:DNA Length:8
1OUP F 9 GCGATCGC 16
Chain G from PDB Type:DNA Length:2
1OUP G 7 GC 8
| Legend: |
|
→ Mismatch |
(orange background) |
| |
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
| |
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
| |
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
| |
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |
