GO2PDB - JenaLib

Search term(s): GO:2000282

Here you see a subgraph of the complete GO graph, with your query GO:2000282 as the highest hiearchical level and all levels of lower hierarchy. The number of PDB entries, for which a UniProt entry annotated with the corresponding GO term is available, is shown in square brackets for all hiearchical levels of the subgraph.

regulation of cellular amino acid biosynthetic process (GO:2000282)
- negative regulation of cellular amino acid biosynthetic process (GO:2000283)
  - negative regulation of cellular amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (GO:1900403)
  - negative regulation of cellular amino acid biosynthetic process by transcription from RNA polymerase II promoter (GO:0100025)
  - negative regulation of citrulline biosynthetic process (GO:1903249)
    [2 PDB entries]
  - negative regulation of homoserine biosynthetic process (GO:1901711)
  - negative regulation of L-dopa biosynthetic process (GO:1903196)
  - negative regulation of leucine biosynthetic process (GO:2001277)
  - negative regulation of lysine biosynthetic process via aminoadipic acid (GO:1902987)
    - negative regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine (GO:2001195)
  - negative regulation of proline biosynthetic process (GO:1902006)
- positive regulation of cellular amino acid biosynthetic process (GO:2000284)
  - positive regulation of arginine biosynthetic process (GO:1900080)
    - positive regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (GO:1900466)
      [1 PDB entries]
    - positive regulation of arginine biosynthetic process by transcription from RNA polymerase II promoter (GO:0100046)
  - positive regulation of citrulline biosynthetic process (GO:1903250)
  - positive regulation of homoserine biosynthetic process (GO:1901712)
  - positive regulation of L-dopa biosynthetic process (GO:1903197)
    [45 PDB entries]
  - positive regulation of leucine biosynthetic process (GO:2001278)
    [3 PDB entries]
  - positive regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine (GO:2001196)
- regulation of arginine biosynthetic process (GO:1900079)
  - positive regulation of arginine biosynthetic process (GO:1900080)
    - positive regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (GO:1900466)
      [1 PDB entries]
    - positive regulation of arginine biosynthetic process by transcription from RNA polymerase II promoter (GO:0100046)
  - regulation of arginine biosynthetic process via ornithine (GO:2000013)
    [3 PDB entries]
- regulation of citrulline biosynthetic process (GO:1903248)
  - negative regulation of citrulline biosynthetic process (GO:1903249)
    [2 PDB entries]
  - positive regulation of citrulline biosynthetic process (GO:1903250)
- regulation of homoserine biosynthetic process (GO:1901710)
  [3 PDB entries]
- regulation of L-dopa biosynthetic process (GO:1903195)
  - negative regulation of L-dopa biosynthetic process (GO:1903196)
  - positive regulation of L-dopa biosynthetic process (GO:1903197)
    [45 PDB entries]
- regulation of leucine biosynthetic process (GO:2001276)
  - negative regulation of leucine biosynthetic process (GO:2001277)
  - positive regulation of leucine biosynthetic process (GO:2001278)
    [3 PDB entries]
- regulation of lysine biosynthetic process via aminoadipic acid (GO:1902986)
  - negative regulation of lysine biosynthetic process via aminoadipic acid (GO:1902987)
    - negative regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine (GO:2001195)
  - regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine (GO:2001194)
    - negative regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine (GO:2001195)
    - positive regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine (GO:2001196)
- regulation of proline biosynthetic process (GO:1902005)
  - negative regulation of proline biosynthetic process (GO:1902006)

Click on the GO accession number to get a tree view of the GO hierarchy without information on PDB entries. In this case your query level and all levels of higher hierarchy up to the root level Gene_Ontology (GO:0003673) are displayed.

If you enter the GO tree somewhere and if you want to get a view of the whole tree first click on the GO name. This yields the low-hierarchy part. Then click on the GO accession number of the lowest hierarchical level. This gives a view of the complete tree. Note, that certain GO terms belong to more than one path.

GO2PDB@JenaLib
Tue Jul 9 10:48:17 2019