GO2PDB - JenaLib

Search term(s): GO:1901361

Here you see a subgraph of the complete GO graph, with your query GO:1901361 as the highest hiearchical level and all levels of lower hierarchy. The number of PDB entries, for which a UniProt entry annotated with the corresponding GO term is available, is shown in square brackets for all hiearchical levels of the subgraph.

organic cyclic compound catabolic process (GO:1901361)
- (+)-kotanin catabolic process (GO:1900595)
- (-)-exo-alpha-bergamotene catabolic process (GO:1901939)
- (-)-secologanin catabolic process (GO:1900993)
- 1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane catabolic process (GO:0042188)
- 1,4-dichlorobenzene catabolic process (GO:0019261)
- 1,5-anhydro-D-fructose catabolic process (GO:1901802)
- 2,4,5-trichlorophenoxyacetic acid catabolic process (GO:0046228)
- 2,4-dichlorobenzoate catabolic process (GO:0046298)
- 2,4-dichlorophenoxyacetic acid catabolic process (GO:0046300)
  [2 PDB entries]
- 2-aminobenzenesulfonate catabolic process (GO:0046230)
- 2-chloro-N-isopropylacetanilide catabolic process (GO:0046302)
- 3-(3-hydroxy)phenylpropionate catabolic process (GO:0019622)
  [1 PDB entries]
- 3-methylquinoline catabolic process (GO:0019335)
- 3-phenylpropionate catabolic process (GO:0019380)
  [3 PDB entries]
- 4-toluenecarboxylate catabolic process (GO:0019612)
- 6-hydroxycineole catabolic process (GO:0019639)
- 7,8-didemethyl-8-hydroxy-5-deazariboflavin catabolic process (GO:1901851)
- adamantanone catabolic process (GO:0019263)
- all-trans-neoxanthin catabolic process (GO:1901832)
- allantoin catabolic process (GO:0000256)
  [19 PDB entries]
- aromatic amino acid family catabolic process (GO:0009074)
  [2 PDB entries]
- asperfuranone catabolic process (GO:1900553)
- benzene catabolic process (GO:1900996)
- benzoate catabolic process (GO:0043639)
  [36 PDB entries]
- beta-caryophyllene catabolic process (GO:1901936)
- beta-lactam antibiotic catabolic process (GO:0030655)
  [343 PDB entries]
- biotin catabolic process (GO:0042367)
- biphenyl catabolic process (GO:0070980)
- cadinene catabolic process (GO:1901927)
- caprolactam catabolic process (GO:0019384)
- carbazole catabolic process (GO:0046232)
  [26 PDB entries]
- chanoclavine-I aldehyde catabolic process (GO:1900568)
- chanoclavine-I catabolic process (GO:1900565)
- cocaine catabolic process (GO:0050784)
  [14 PDB entries]
- creatinine catabolic process (GO:0006602)
  [13 PDB entries]
- cyclopentanol catabolic process (GO:0033022)
- daunorubicin catabolic process (GO:1901770)
- demethylkotanin catabolic process (GO:1900598)
- dibenzo-p-dioxin catabolic process (GO:0019341)
  [1 PDB entries]
- dibenzofuran catabolic process (GO:0019340)
- dibenzothiophene catabolic process (GO:0018896)
  [4 PDB entries]
- ecgonine methyl ester catabolic process (GO:1901868)
- ecgonone methyl ester catabolic process (GO:1901871)
- ectoine catabolic process (GO:0042400)
  [2 PDB entries]
- flavin-containing compound catabolic process (GO:0042728)
  - flavin adenine dinucleotide catabolic process (GO:0072389)
    [40 PDB entries]
  - FMN catabolic process (GO:0032363)
  - riboflavin catabolic process (GO:0009232)
- fluorene catabolic process (GO:0019429)
- fumagillin catabolic process (GO:1902085)
- fumiquinazoline catabolic process (GO:1900774)
  - fumiquinazoline A catabolic process (GO:1900777)
  - fumiquinazoline C catabolic process (GO:1900780)
  - fumiquinazoline F catabolic process (GO:1900783)
- gliotoxin catabolic process (GO:2001309)
- granaticin catabolic process (GO:1901108)
- imidazole-containing compound catabolic process (GO:0052805)
  - histamine catabolic process (GO:0001695)
  - histidine catabolic process (GO:0006548)
    [30 PDB entries]
  - nitroimidazole catabolic process (GO:0052804)
    - bicyclic nitroimidazole catabolic process (GO:0052800)
- indole-containing compound catabolic process (GO:0042436)
  - brevianamide F catabolic process (GO:1900804)
  - fumiquinazoline F catabolic process (GO:1900783)
  - indolalkylamine catabolic process (GO:0046218)
    - tryptophan catabolic process (GO:0006569)
      [112 PDB entries]
  - indole catabolic process (GO:0042433)
  - indole glucosinolate catabolic process (GO:0042344)
  - indole phytoalexin catabolic process (GO:0046216)
  - indoleacetic acid catabolic process (GO:0042437)
  - melatonin catabolic process (GO:0042442)
  - serotonin catabolic process (GO:0042429)
    [11 PDB entries]
- isoquinoline alkaloid catabolic process (GO:0071274)
  - (S)-reticuline catabolic process (GO:1901011)
  - (S)-scoulerine catabolic process (GO:1901008)
  - codeine catabolic process (GO:2001292)
  - morphine catabolic process (GO:0071273)
- L-kynurenine catabolic process (GO:0097053)
  [13 PDB entries]
- lactone catabolic process (GO:1901335)
  [6 PDB entries]
- leukotriene A4 catabolic process (GO:1901752)
- limonene catabolic process (GO:0046251)
- lincomycin catabolic process (GO:1901773)
- lipoate catabolic process (GO:0032323)
- mandelate catabolic process (GO:0019596)
  [64 PDB entries]
- methylnaphthalene catabolic process (GO:0043635)
- mitomycin C catabolic process (GO:1901776)
- molybdopterin cofactor catabolic process (GO:0032325)
  - Mo-molybdopterin cofactor catabolic process (GO:0032326)
  - W-molybdopterin cofactor catabolic process (GO:0032327)
- monensin A catabolic process (GO:1901729)
- naphthalene catabolic process (GO:1901170)
  [8 PDB entries]
- naphtho-gamma-pyrone catabolic process (GO:1900786)
  - fonsecin catabolic process (GO:1900768)
- nicotianamine catabolic process (GO:0030419)
- nitrobenzene catabolic process (GO:1900998)
- nucleobase catabolic process (GO:0046113)
  [5 PDB entries]
- nucleobase-containing compound catabolic process (GO:0034655)
  - DNA catabolic process (GO:0006308)
    [65 PDB entries]
  - nucleobase-containing small molecule catabolic process (GO:0034656)
    [44 PDB entries]
  - nucleoside phosphate catabolic process (GO:1901292)
    - nucleoside bisphosphate catabolic process (GO:0033869)
    - nucleoside diphosphate catabolic process (GO:0009134)
    - nucleoside monophosphate catabolic process (GO:0009125)
    - nucleoside triphosphate catabolic process (GO:0009143)
      [37 PDB entries]
    - nucleotide catabolic process (GO:0009166)
      [129 PDB entries]
  - RNA catabolic process (GO:0006401)
    [219 PDB entries]
- ochratoxin A catabolic process (GO:1900817)
  [4 PDB entries]
- ommochrome catabolic process (GO:0046153)
- organic heteropentacyclic compound catabolic process (GO:1901377)
  - aflatoxin catabolic process (GO:0046223)
    [1 PDB entries]
  - codeine catabolic process (GO:2001292)
  - F-9775A catabolic process (GO:1900610)
  - F-9775B catabolic process (GO:1900613)
  - fumitremorgin B catabolic process (GO:1900771)
  - morphine catabolic process (GO:0071273)
  - sterigmatocystin catabolic process (GO:0045574)
  - vindoline catabolic process (GO:1900984)
- orlandin catabolic process (GO:1900820)
- p-cumate catabolic process (GO:1901782)
- pentacyclic triterpenoid catabolic process (GO:0019741)
  - 11-oxo-beta-amyrin catabolic process (GO:1902382)
  - glycyrrhetinate catabolic process (GO:1902385)
- phenanthrene catabolic process (GO:0042216)
  - phenanthrene catabolic process via trans-9(R),10(R)-dihydrodiolphenanthrene (GO:0018956)
  - phenanthrene catabolic process via trans-9(S),10(S)-dihydrodiolphenanthrene (GO:0018957)
- phenol-containing compound catabolic process (GO:0019336)
  [4 PDB entries]
- phenylacetate catabolic process (GO:0010124)
  [39 PDB entries]
- phenylmercury acetate catabolic process (GO:0019506)
- phenylpropanoid catabolic process (GO:0046271)
  - chalcone catabolic process (GO:0046280)
  - cinnamic acid catabolic process (GO:0046281)
    [10 PDB entries]
  - cinnamic acid ester catabolic process (GO:0046282)
  - coumarin catabolic process (GO:0046226)
    [14 PDB entries]
  - eugenol catabolic process (GO:0042856)
  - isoflavonoid catabolic process (GO:0046288)
    - isoflavonoid phytoalexin catabolic process (GO:0046290)
  - lignan catabolic process (GO:0046273)
    - (+)-lariciresinol catabolic process (GO:1902131)
    - (+)-pinoresinol catabolic process (GO:1902125)
      [1 PDB entries]
    - (+)-secoisolariciresinol catabolic process (GO:1902134)
    - (-)-lariciresinol catabolic process (GO:1902128)
      [1 PDB entries]
    - (-)-pinoresinol catabolic process (GO:1902123)
      [1 PDB entries]
    - (-)-secoisolariciresinol catabolic process (GO:1902137)
  - lignin catabolic process (GO:0046274)
    [62 PDB entries]
- phthalate catabolic process (GO:0046239)
- proline catabolic process (GO:0006562)
  [33 PDB entries]
- pseurotin A catabolic process (GO:1900789)
- pteridine-containing compound catabolic process (GO:0042560)
  - 5,6,7,8-tetrahydromethanopterin catabolic process (GO:1901284)
  - 5,6,7,8-tetrahydrosarcinapterin catabolic process (GO:1901854)
  - folic acid-containing compound catabolic process (GO:0009397)
    - 10-formyltetrahydrofolate catabolic process (GO:0009258)
      [23 PDB entries]
    - folic acid catabolic process (GO:0046657)
      [4 PDB entries]
  - pteridine catabolic process (GO:0019990)
  - tetrahydrobiopterin catabolic process (GO:0046147)
- purine-containing compound catabolic process (GO:0072523)
  - discadenine catabolic process (GO:0034269)
  - isopentenyl adenine catabolic process (GO:0034266)
  - purine nucleobase catabolic process (GO:0006145)
    [9 PDB entries]
  - purine nucleoside bisphosphate catabolic process (GO:0034034)
    - 2-hydroxybenzoyl-CoA catabolic process (GO:1901886)
    - acetyl-CoA catabolic process (GO:0046356)
      [6 PDB entries]
    - benzoyl-CoA catabolic process (GO:1901788)
    - coenzyme A catabolic process (GO:0015938)
    - fatty-acyl-CoA catabolic process (GO:0036115)
    - malonyl-CoA catabolic process (GO:2001294)
      [2 PDB entries]
    - purine ribonucleoside bisphosphate catabolic process (GO:0034037)
    - succinyl-CoA catabolic process (GO:1901289)
      [17 PDB entries]
  - purine nucleoside catabolic process (GO:0006152)
    [49 PDB entries]
  - purine nucleotide catabolic process (GO:0006195)
    [102 PDB entries]
  - urate catabolic process (GO:0019628)
    [97 PDB entries]
- pyridine-containing compound catabolic process (GO:0072526)
  - 2,5-dihydroxypyridine catabolic process (GO:0051166)
    - 2,5-dihydroxypyridine catabolic process to fumarate (GO:0019508)
  - aspyridone A catabolic process (GO:1901517)
  - aspyridone B catabolic process (GO:1901520)
  - nicotinate catabolic process (GO:1901848)
  - pyridine catabolic process (GO:0046221)
  - pyridine nucleoside catabolic process (GO:0070638)
    - nicotinamide riboside catabolic process (GO:0006738)
      [46 PDB entries]
  - pyridine nucleotide catabolic process (GO:0019364)
    - NAD catabolic process (GO:0019677)
      [6 PDB entries]
    - NADP catabolic process (GO:0006742)
      [3 PDB entries]
  - quinolinate catabolic process (GO:0034213)
    [18 PDB entries]
  - vitamin B6 catabolic process (GO:0042820)
    [7 PDB entries]
- pyrimidine-containing compound catabolic process (GO:0072529)
  - 5-methylcytosine catabolic process (GO:0006211)
    [3 PDB entries]
  - pyrimidine nucleobase catabolic process (GO:0006208)
    [4 PDB entries]
  - pyrimidine nucleoside catabolic process (GO:0046135)
    [41 PDB entries]
  - pyrimidine nucleotide catabolic process (GO:0006244)
    - CDP-diacylglycerol catabolic process (GO:0046342)
      [1 PDB entries]
    - pyrimidine deoxyribonucleotide catabolic process (GO:0009223)
      [23 PDB entries]
    - pyrimidine ribonucleotide catabolic process (GO:0009222)
  - thiamine diphosphate catabolic process (GO:0042358)
  - thiamine-containing compound catabolic process (GO:0042725)
    - thiamine catabolic process (GO:0009230)
      [4 PDB entries]
- quinate catabolic process (GO:0019631)
- s-triazine compound catabolic process (GO:0042204)
  - atrazine catabolic process (GO:0019381)
    [13 PDB entries]
  - cyanuric acid catabolic process (GO:0042200)
  - N-cyclopropylmelamine catabolic process (GO:0042202)
- scopolamine catabolic process (GO:1900990)
- steroid catabolic process (GO:0006706)
  [43 PDB entries]
- stilbene catabolic process (GO:0046272)
  [102 PDB entries]
- styrene catabolic process (GO:0042207)
- tensidol A catabolic process (GO:1900604)
- tensidol B catabolic process (GO:1900607)
- terrequinone A catabolic process (GO:1900795)
- tetrapyrrole catabolic process (GO:0033015)
  - cobalamin catabolic process (GO:0042366)
  - corrin catabolic process (GO:0046141)
  - negative regulation of tetrapyrrole catabolic process (GO:1901405)
    - negative regulation of chlorophyll catabolic process (GO:1903647)
  - porphyrin-containing compound catabolic process (GO:0006787)
    - bilirubin conjugation (GO:0006789)
    - chlorophyll catabolic process (GO:0015996)
      [16 PDB entries]
    - heme catabolic process (GO:0042167)
      [84 PDB entries]
    - heme oxidation (GO:0006788)
      [85 PDB entries]
  - positive regulation of tetrapyrrole catabolic process (GO:1901406)
    - positive regulation of chlorophyll catabolic process (GO:1903648)
  - regulation of tetrapyrrole catabolic process (GO:1901404)
    - negative regulation of tetrapyrrole catabolic process (GO:1901405)
      - negative regulation of chlorophyll catabolic process (GO:1903647)
    - positive regulation of tetrapyrrole catabolic process (GO:1901406)
      - positive regulation of chlorophyll catabolic process (GO:1903648)
    - regulation of chlorophyll catabolic process (GO:0010271)
- toluene-containing compound catabolic process (GO:0072491)
  - anaerobic 2,4,6-trinitrotoluene metabolic process (GO:0018975)
    - anaerobic 2,4,6-trinitrotoluene catabolic process (GO:0046258)
  - cresol catabolic process (GO:0046199)
    - m-cresol catabolic process (GO:0042213)
    - p-cresol catabolic process (GO:1901785)
  - nitrotoluene catabolic process (GO:0046263)
    - 4-nitrotoluene catabolic process (GO:0019258)
    - trinitrotoluene catabolic process (GO:0046260)
  - orcinol catabolic process (GO:0042209)
  - p-cymene catabolic process (GO:0019334)
  - toluene catabolic process (GO:0042203)
    [47 PDB entries]
  - toluene-4-sulfonate catabolic process (GO:0046269)
- tricyclic triterpenoid catabolic process (GO:0010684)
- verruculogen catabolic process (GO:1902180)
- xylene catabolic process (GO:0042184)
  [11 PDB entries]

Click on the GO accession number to get a tree view of the GO hierarchy without information on PDB entries. In this case your query level and all levels of higher hierarchy up to the root level Gene_Ontology (GO:0003673) are displayed.

If you enter the GO tree somewhere and if you want to get a view of the whole tree first click on the GO name. This yields the low-hierarchy part. Then click on the GO accession number of the lowest hierarchical level. This gives a view of the complete tree. Note, that certain GO terms belong to more than one path.

GO2PDB@JenaLib
Tue Jul 9 10:48:17 2019