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   Search term(s): GO:1901160

Here you see a subgraph of the complete GO graph, with your query GO:1901160 as the highest hiearchical level and all levels of lower hierarchy. The number of PDB entries, for which a UniProt entry annotated with the corresponding GO term is available, is shown in square brackets for all hiearchical levels of the subgraph.

• primary amino compound metabolic process (GO:1901160)
  • 2-aminoethylphosphonate metabolic process (GO:0046433)
    • 2-aminoethylphosphonate catabolic process (GO:0019635)
  • atrazine catabolic process to isopropylamine (GO:0019624)
  • chrysobactin metabolic process (GO:0042857)
    • chrysobactin biosynthetic process (GO:0042858)
    • chrysobactin catabolic process (GO:0042859)
  • ethanolamine metabolic process (GO:0006580)
    [22 PDB entries]
    
    
  • ethanolamine biosynthetic process (GO:0046335)
  • ethanolamine catabolic process (GO:0046336)
    [21 PDB entries]
    
    
  • methylamine metabolic process (GO:0030416)
    [43 PDB entries]
    
    
  • methane biosynthetic process from methylamine (GO:2001128)
    • negative regulation of methane biosynthetic process from methylamine (GO:1900349)
    • positive regulation of methane biosynthetic process from methylamine (GO:1900350)
    • regulation of methane biosynthetic process from methylamine (GO:1900348)
  • phenylethylamine metabolic process (GO:0042443)
    [6 PDB entries]
    
    
  • phenylethylamine biosynthetic process (GO:0042444)
    • phenylethylamine biosynthetic process involved in synaptic transmission (GO:0090508)
  • phenylethylamine catabolic process (GO:0019607)
    [16 PDB entries]
    
    
  • phenylethylamine metabolic process involved in synaptic transmission (GO:0090507)
    • phenylethylamine biosynthetic process involved in synaptic transmission (GO:0090508)
  • phosphatidylcholine biosynthesis from phosphoryl-ethanolamine via CDP-N-methylethanolamine (GO:0070833)
  • phosphatidylcholine biosynthesis from phosphoryl-ethanolamine via N-dimethylethanolamine phosphate and CDP-choline (GO:0070832)
  • phosphatidylcholine biosynthesis from phosphoryl-ethanolamine via N-dimethylethanolamine phosphate and CDP-N-dimethylethanolamine (GO:0070834)
  • primary amino compound biosynthetic process (GO:1901162)
    • agmatine biosynthetic process (GO:0097055)
    • chrysobactin biosynthetic process (GO:0042858)
    • ethanolamine biosynthetic process (GO:0046335)
    • phenylethylamine biosynthetic process (GO:0042444)
      • phenylethylamine biosynthetic process involved in synaptic transmission (GO:0090508)
    • serotonin biosynthetic process (GO:0042427)
      [13 PDB entries]
      
      
    • negative regulation of serotonin biosynthetic process (GO:1905628)
    • positive regulation of serotonin biosynthetic process (GO:1905629)
    • regulation of serotonin biosynthetic process (GO:1905627)
    • serotonin biosynthetic process from tryptophan (GO:0006587)
      [1 PDB entries]
      
      
    • tyramine biosynthetic process (GO:1901695)
  • primary amino compound catabolic process (GO:1901161)
    • 2-aminoethylphosphonate catabolic process (GO:0019635)
    • chrysobactin catabolic process (GO:0042859)
    • ethanolamine catabolic process (GO:0046336)
      [21 PDB entries]
      
      
    • phenylethylamine catabolic process (GO:0019607)
      [16 PDB entries]
      
      
    • serotonin catabolic process (GO:0042429)
      [11 PDB entries]
      
      
  • serotonin metabolic process (GO:0042428)
    [51 PDB entries]
    
    
  • serotonin biosynthetic process (GO:0042427)
    [13 PDB entries]
    
    
  • negative regulation of serotonin biosynthetic process (GO:1905628)
  • positive regulation of serotonin biosynthetic process (GO:1905629)
  • regulation of serotonin biosynthetic process (GO:1905627)
  • serotonin biosynthetic process from tryptophan (GO:0006587)
    [1 PDB entries]
    
    
  • serotonin catabolic process (GO:0042429)
    [11 PDB entries]
    
    

Click on the GO accession number to get a tree view of the GO hierarchy without information on PDB entries. In this case your query level and all levels of higher hierarchy up to the root level Gene_Ontology (GO:0003673) are displayed.

If you enter the GO tree somewhere and if you want to get a view of the whole tree first click on the GO name. This yields the low-hierarchy part. Then click on the GO accession number of the lowest hierarchical level. This gives a view of the complete tree. Note, that certain GO terms belong to more than one path.

GO2PDB@JenaLib
Tue Jul 9 10:48:17 2019