GO2PDB - JenaLib

Search term(s): GO:1900619

Here you see a subgraph of the complete GO graph, with your query GO:1900619 as the highest hiearchical level and all levels of lower hierarchy. The number of PDB entries, for which a UniProt entry annotated with the corresponding GO term is available, is shown in square brackets for all hiearchical levels of the subgraph.

acetate ester metabolic process (GO:1900619)
- acetate ester biosynthetic process (GO:1900620)
  - acetylcholine biosynthetic process (GO:0008292)
    [6 PDB entries]
  - ethyl acetate biosynthetic process (GO:1902819)
  - fumigaclavine C biosynthetic process (GO:1900809)
    - negative regulation of fumigaclavine C biosynthetic process (GO:1900838)
    - positive regulation of fumigaclavine C biosynthetic process (GO:1900839)
    - regulation of fumigaclavine C biosynthetic process (GO:1900837)
  - neosartoricin biosynthetic process (GO:1902050)
    - negative regulation of neosartoricin biosynthetic process (GO:1902054)
    - positive regulation of neosartoricin biosynthetic process (GO:1902055)
    - regulation of neosartoricin biosynthetic process (GO:1902053)
  - vindoline biosynthetic process (GO:1900985)
- acetate ester metabolic process involved in fermentation (GO:1901089)
- acetylcholine metabolic process (GO:0008291)
  - acetylcholine biosynthetic process (GO:0008292)
    [6 PDB entries]
  - acetylcholine catabolic process (GO:0006581)
    [110 PDB entries]
  - negative regulation of acetylcholine metabolic process (GO:0060410)
    - negative regulation of acetylcholine biosynthetic process (GO:1905922)
  - positive regulation of acetylcholine metabolic process (GO:0060409)
    [2 PDB entries]
  - regulation of acetylcholine metabolic process (GO:0060408)
    - negative regulation of acetylcholine metabolic process (GO:0060410)
      - negative regulation of acetylcholine biosynthetic process (GO:1905922)
    - positive regulation of acetylcholine metabolic process (GO:0060409)
      [2 PDB entries]
    - regulation of acetylcholine biosynthetic process (GO:1905921)
- ethyl acetate metabolic process (GO:1902818)
  - ethyl acetate biosynthetic process (GO:1902819)
- fumigaclavine C metabolic process (GO:1900807)
  - fumigaclavine C biosynthetic process (GO:1900809)
    - negative regulation of fumigaclavine C biosynthetic process (GO:1900838)
    - positive regulation of fumigaclavine C biosynthetic process (GO:1900839)
    - regulation of fumigaclavine C biosynthetic process (GO:1900837)
  - fumigaclavine C catabolic process (GO:1900808)
- neosartoricin metabolic process (GO:1902048)
  - neosartoricin biosynthetic process (GO:1902050)
    - negative regulation of neosartoricin biosynthetic process (GO:1902054)
    - positive regulation of neosartoricin biosynthetic process (GO:1902055)
    - regulation of neosartoricin biosynthetic process (GO:1902053)
  - neosartoricin catabolic process (GO:1902049)
- vindoline metabolic process (GO:1900983)
  - vindoline biosynthetic process (GO:1900985)
  - vindoline catabolic process (GO:1900984)

Click on the GO accession number to get a tree view of the GO hierarchy without information on PDB entries. In this case your query level and all levels of higher hierarchy up to the root level Gene_Ontology (GO:0003673) are displayed.

If you enter the GO tree somewhere and if you want to get a view of the whole tree first click on the GO name. This yields the low-hierarchy part. Then click on the GO accession number of the lowest hierarchical level. This gives a view of the complete tree. Note, that certain GO terms belong to more than one path.

GO2PDB@JenaLib
Tue Jul 9 10:48:17 2019