GO2PDB - JenaLib

Search term(s): GO:1900542

Here you see a subgraph of the complete GO graph, with your query GO:1900542 as the highest hiearchical level and all levels of lower hierarchy. The number of PDB entries, for which a UniProt entry annotated with the corresponding GO term is available, is shown in square brackets for all hiearchical levels of the subgraph.

regulation of purine nucleotide metabolic process (GO:1900542)
- negative regulation of purine nucleotide metabolic process (GO:1900543)
  - negative regulation of ATP metabolic process (GO:1903579)
    [2 PDB entries]
  - negative regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway (GO:2001211)
  - negative regulation of purine nucleotide biosynthetic process (GO:1900372)
    - negative regulation of ATP biosynthetic process (GO:2001170)
      [4 PDB entries]
    - negative regulation of butyryl-CoA biosynthetic process from acetyl-CoA (GO:1900495)
    - negative regulation of guanylate cyclase activity (GO:0031283)
      [4 PDB entries]
  - negative regulation of purine nucleotide catabolic process (GO:0033122)
    - negative regulation of butyryl-CoA catabolic process to butanol (GO:1900498)
    - negative regulation of butyryl-CoA catabolic process to butyrate (GO:1900501)
  - negative regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA (GO:1901414)
- positive regulation of purine nucleotide metabolic process (GO:1900544)
  - positive regulation of ATP metabolic process (GO:1903580)
    - positive regulation of ATP biosynthetic process (GO:2001171)
      [61 PDB entries]
    - positive regulation of glucose catabolic process to lactate via pyruvate (GO:1904025)
      [3 PDB entries]
    - positive regulation of glycolytic fermentation to ethanol (GO:2001172)
    - positive regulation of oxidative phosphorylation (GO:1903862)
      [43 PDB entries]
  - positive regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway (GO:1900486)
  - positive regulation of purine nucleotide biosynthetic process (GO:1900373)
    - positive regulation of ATP biosynthetic process (GO:2001171)
      [61 PDB entries]
    - positive regulation of butyryl-CoA biosynthetic process from acetyl-CoA (GO:1900496)
    - positive regulation of guanylate cyclase activity (GO:0031284)
      [469 PDB entries]
    - positive regulation of purine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (GO:1900418)
    - positive regulation of purine nucleotide biosynthetic process by transcription from RNA polymerase II promoter (GO:0100036)
  - positive regulation of purine nucleotide catabolic process (GO:0033123)
    - positive regulation of butyryl-CoA catabolic process to butanol (GO:1900499)
    - positive regulation of butyryl-CoA catabolic process to butyrate (GO:1900502)
  - positive regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA (GO:1901415)
- regulation of ATP metabolic process (GO:1903578)
  [6 PDB entries]
- regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway (GO:2001210)
  - negative regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway (GO:2001211)
  - positive regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway (GO:1900486)
- regulation of purine nucleotide biosynthetic process (GO:1900371)
  - negative regulation of purine nucleotide biosynthetic process (GO:1900372)
    - negative regulation of ATP biosynthetic process (GO:2001170)
      [4 PDB entries]
    - negative regulation of butyryl-CoA biosynthetic process from acetyl-CoA (GO:1900495)
    - negative regulation of guanylate cyclase activity (GO:0031283)
      [4 PDB entries]
  - positive regulation of purine nucleotide biosynthetic process (GO:1900373)
    - positive regulation of ATP biosynthetic process (GO:2001171)
      [61 PDB entries]
    - positive regulation of butyryl-CoA biosynthetic process from acetyl-CoA (GO:1900496)
    - positive regulation of guanylate cyclase activity (GO:0031284)
      [469 PDB entries]
    - positive regulation of purine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (GO:1900418)
    - positive regulation of purine nucleotide biosynthetic process by transcription from RNA polymerase II promoter (GO:0100036)
  - regulation of acyl-CoA biosynthetic process (GO:0050812)
    [18 PDB entries]
  - regulation of ATP biosynthetic process (GO:2001169)
    - negative regulation of ATP biosynthetic process (GO:2001170)
      [4 PDB entries]
    - positive regulation of ATP biosynthetic process (GO:2001171)
      [61 PDB entries]
    - regulation of glycolytic process (GO:0006110)
      [92 PDB entries]
    - regulation of mitochondrial ATP synthesis coupled proton transport (GO:1905706)
  - regulation of coenzyme A biosynthetic process (GO:0080020)
  - regulation of guanylate cyclase activity (GO:0031282)
    [3 PDB entries]
- regulation of purine nucleotide catabolic process (GO:0033121)
  - negative regulation of purine nucleotide catabolic process (GO:0033122)
    - negative regulation of butyryl-CoA catabolic process to butanol (GO:1900498)
    - negative regulation of butyryl-CoA catabolic process to butyrate (GO:1900501)
  - positive regulation of purine nucleotide catabolic process (GO:0033123)
    - positive regulation of butyryl-CoA catabolic process to butanol (GO:1900499)
    - positive regulation of butyryl-CoA catabolic process to butyrate (GO:1900502)
  - regulation of butyryl-CoA catabolic process to butanol (GO:1900497)
    - negative regulation of butyryl-CoA catabolic process to butanol (GO:1900498)
    - positive regulation of butyryl-CoA catabolic process to butanol (GO:1900499)
  - regulation of butyryl-CoA catabolic process to butyrate (GO:1900500)
    - negative regulation of butyryl-CoA catabolic process to butyrate (GO:1900501)
    - positive regulation of butyryl-CoA catabolic process to butyrate (GO:1900502)
- regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA (GO:1901413)
  - negative regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA (GO:1901414)
  - positive regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA (GO:1901415)

Click on the GO accession number to get a tree view of the GO hierarchy without information on PDB entries. In this case your query level and all levels of higher hierarchy up to the root level Gene_Ontology (GO:0003673) are displayed.

If you enter the GO tree somewhere and if you want to get a view of the whole tree first click on the GO name. This yields the low-hierarchy part. Then click on the GO accession number of the lowest hierarchical level. This gives a view of the complete tree. Note, that certain GO terms belong to more than one path.

GO2PDB@JenaLib
Tue Jul 9 10:48:17 2019