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   Search term(s): GO:0099536

Here you see a subgraph of the complete GO graph, with your query GO:0099536 as the highest hiearchical level and all levels of lower hierarchy. The number of PDB entries, for which a UniProt entry annotated with the corresponding GO term is available, is shown in square brackets for all hiearchical levels of the subgraph.

• synaptic signaling (GO:0099536)
  • postsynaptic signal transduction (GO:0098926)
    • postsynapse to nucleus signaling pathway (GO:0099527)
      • regulation of postsynapse to nucleus signaling pathway (GO:1905539)
  • signal release from synapse (GO:0099643)
    • neurotransmitter secretion (GO:0007269)
      [177 PDB entries]
      
      
    • presynaptic dense core vesicle exocytosis (GO:0099525)
      • neuropeptide secretion from presynapse (GO:0099539)
      • regulation of presynaptic dense core granule exocytosis (GO:0099161)
    • synaptic vesicle exocytosis (GO:0016079)
      [94 PDB entries]
      
      
    • calcium ion-regulated exocytosis of neurotransmitter (GO:0048791)
      [78 PDB entries]
      
      
    • calcium-dependent activation of synaptic vesicle fusion (GO:0099502)
    • negative regulation of synaptic vesicle exocytosis (GO:2000301)
      [85 PDB entries]
      
      
    • positive regulation of synaptic vesicle exocytosis (GO:2000302)
      [5 PDB entries]
      
      
    • regulation of synaptic vesicle exocytosis (GO:2000300)
      [20 PDB entries]
      
      
    • spontaneous exocytosis of neurotransmitter (GO:0048792)
    • synaptic vesicle docking (GO:0016081)
      [34 PDB entries]
      
      
    • synaptic vesicle fusion to presynaptic active zone membrane (GO:0031629)
      [40 PDB entries]
      
      
    • synaptic vesicle priming (GO:0016082)
      [46 PDB entries]
      
      
    • synaptic vesicle targeting (GO:0016080)
      [19 PDB entries]
      
      
  • synaptic signaling by nitric oxide (GO:0099163)
    • regulation of synaptic signaling by nitric oxide (GO:0150045)
    • trans-synaptic signaling by nitric oxide (GO:0099548)
      • anterograde trans-synaptic signaling by nitric oxide (GO:0098940)
      • retrograde trans-synaptic signaling by nitric oxide (GO:0098924)
      • trans-synaptic signaling by nitric oxide, modulating synaptic transmission (GO:0099555)
  • synaptic signaling via neuropeptide (GO:0099538)
    • neuropeptide secretion from presynapse (GO:0099539)
    • trans-synaptic signaling by neuropeptide (GO:0099540)
      • retrograde trans-synaptic signaling by neuropeptide (GO:0099082)
      • trans-synaptic signaling by neuropeptide, modulating synaptic transmission (GO:0099551)
  • trans-synaptic signaling (GO:0099537)
    • anterograde trans-synaptic signaling (GO:0098916)
      • anterograde trans-synaptic signaling by nitric oxide (GO:0098940)
      • anterograde trans-synaptic signaling by trans-synaptic protein complex (GO:0098941)
      • chemical synaptic transmission (GO:0007268)
        [947 PDB entries]
        
        
    • regulation of trans-synaptic signaling (GO:0099177)
      • modulation of chemical synaptic transmission (GO:0050804)
        [330 PDB entries]
        
        
      • regulation of retrograde trans-synaptic signaling by endocanabinoid (GO:0099178)
      • regulation of retrograde trans-synaptic signaling by neuropeptide (GO:1905432)
      • regulation of retrograde trans-synaptic signaling by trans-synaptic protein complex (GO:0099176)
    • retrograde trans-synaptic signaling (GO:0098917)
      • retrograde trans-synaptic signaling by lipid (GO:0098920)
      • retrograde trans-synaptic signaling by neuropeptide (GO:0099082)
      • retrograde trans-synaptic signaling by soluble gas (GO:0098923)
      • retrograde trans-synaptic signaling by trans-synaptic protein complex (GO:0098942)
    • trans-synaptic signaling by BDNF (GO:0099191)
      • trans-synaptic signaling by BDNF, modulating synaptic transmission (GO:0099183)
    • trans-synaptic signaling by lipid (GO:0099541)
      • retrograde trans-synaptic signaling by lipid (GO:0098920)
      • trans-synaptic signaling by endocannabinoid (GO:0099542)
      • trans-synaptic signaling by lipid, modulating synaptic transmission (GO:0099552)
    • trans-synaptic signaling by neuropeptide (GO:0099540)
      • retrograde trans-synaptic signaling by neuropeptide (GO:0099082)
      • trans-synaptic signaling by neuropeptide, modulating synaptic transmission (GO:0099551)
    • trans-synaptic signaling by soluble gas (GO:0099543)
      • retrograde trans-synaptic signaling by soluble gas (GO:0098923)
      • trans-synaptic signaling by carbon monoxide (GO:0099549)
      • trans-synaptic signaling by nitric oxide (GO:0099548)
        • anterograde trans-synaptic signaling by nitric oxide (GO:0098940)
        • retrograde trans-synaptic signaling by nitric oxide (GO:0098924)
        • trans-synaptic signaling by nitric oxide, modulating synaptic transmission (GO:0099555)
      • trans-synaptic signaling by soluble gas, modulating synaptic transmission (GO:0099554)
    • trans-synaptic signaling by trans-synaptic complex (GO:0099545)
      • anterograde trans-synaptic signaling by trans-synaptic protein complex (GO:0098941)
      • retrograde trans-synaptic signaling by trans-synaptic protein complex (GO:0098942)
      • trans-synaptic signaling by trans-synaptic complex, modulating synaptic transmission (GO:0099557)
    • trans-synaptic signaling, modulating synaptic transmission (GO:0099550)
      • trans-synaptic signaling by BDNF, modulating synaptic transmission (GO:0099183)
      • trans-synaptic signaling by lipid, modulating synaptic transmission (GO:0099552)
      • trans-synaptic signaling by neuropeptide, modulating synaptic transmission (GO:0099551)
      • trans-synaptic signaling by soluble gas, modulating synaptic transmission (GO:0099554)
      • trans-synaptic signaling by trans-synaptic complex, modulating synaptic transmission (GO:0099557)
    • trans-synaptic signalling via exosome (GO:0099157)

Click on the GO accession number to get a tree view of the GO hierarchy without information on PDB entries. In this case your query level and all levels of higher hierarchy up to the root level Gene_Ontology (GO:0003673) are displayed.

If you enter the GO tree somewhere and if you want to get a view of the whole tree first click on the GO name. This yields the low-hierarchy part. Then click on the GO accession number of the lowest hierarchical level. This gives a view of the complete tree. Note, that certain GO terms belong to more than one path.

GO2PDB@JenaLib
Tue Jul 9 10:48:17 2019