GO2PDB - JenaLib

Search term(s): GO:0098657

Here you see a subgraph of the complete GO graph, with your query GO:0098657 as the highest hiearchical level and all levels of lower hierarchy. The number of PDB entries, for which a UniProt entry annotated with the corresponding GO term is available, is shown in square brackets for all hiearchical levels of the subgraph.

import into cell (GO:0098657)
[10 PDB entries]

DNA import into cell involved in transformation (GO:0009290)
endocytosis (GO:0006897)
[1266 PDB entries]

caveolin-mediated endocytosis (GO:0072584)
[119 PDB entries]

caveolin-mediated endocytosis of virus by host cell (GO:0075513)
[34 PDB entries]
negative regulation of caveolin-mediated endocytosis (GO:2001287)
[5 PDB entries]
positive regulation of caveolin-mediated endocytosis (GO:2001288)
[9 PDB entries]
regulation of caveolin-mediated endocytosis (GO:2001286)
[153 PDB entries]

endocytosis involved in viral entry into host cell (GO:0075509)
[1393 PDB entries]

macropinocytosis involved in viral entry into host cell (GO:0075510)
receptor-mediated endocytosis of virus by host cell (GO:0019065)
[455 PDB entries]

negative regulation of endocytosis (GO:0045806)
[76 PDB entries]

negative regulation of caveolin-mediated endocytosis (GO:2001287)
[5 PDB entries]
negative regulation of phagocytosis (GO:0050765)
[68 PDB entries]
negative regulation of pinocytosis (GO:0048550)
[52 PDB entries]
negative regulation of receptor-mediated endocytosis (GO:0048261)
[66 PDB entries]
negative regulation of synaptic vesicle endocytosis (GO:1900243)
negative regulation of ubiquitin-dependent endocytosis (GO:2000396)

phagocytosis (GO:0006909)
[400 PDB entries]

apoptotic cell clearance (GO:0043277)
[109 PDB entries]
immune response-regulating cell surface receptor signaling pathway involved in phagocytosis (GO:0002433)
negative regulation of phagocytosis (GO:0050765)
[68 PDB entries]
opsonization (GO:0008228)
[34 PDB entries]
phagocytosis, engulfment (GO:0006911)
[719 PDB entries]
phagocytosis, recognition (GO:0006910)
[629 PDB entries]
phagolysosome assembly (GO:0001845)
[15 PDB entries]
positive regulation of phagocytosis (GO:0050766)
[375 PDB entries]
regulation of phagocytosis (GO:0050764)
[133 PDB entries]

pinocytosis (GO:0006907)
[17 PDB entries]

macropinocytosis (GO:0044351)
[187 PDB entries]
micropinocytosis (GO:0044350)
multi-organism pinocytosis (GO:1902537)
negative regulation of pinocytosis (GO:0048550)
[52 PDB entries]
positive regulation of pinocytosis (GO:0048549)
[10 PDB entries]
regulation of pinocytosis (GO:0048548)

positive regulation of endocytosis (GO:0045807)
[114 PDB entries]

positive regulation of caveolin-mediated endocytosis (GO:2001288)
[9 PDB entries]
positive regulation of phagocytosis (GO:0050766)
[375 PDB entries]
positive regulation of pinocytosis (GO:0048549)
[10 PDB entries]
positive regulation of receptor-mediated endocytosis (GO:0048260)
[1034 PDB entries]
positive regulation of synaptic vesicle endocytosis (GO:1900244)
[7 PDB entries]
positive regulation of ubiquitin-dependent endocytosis (GO:2000397)
[16 PDB entries]

postsynaptic endocytosis (GO:0140239)
- postsynaptic neurotransmitter receptor internalization (GO:0098884)
presynaptic endocytosis (GO:0140238)
- synaptic vesicle endocytosis (GO:0048488)
  [109 PDB entries]
receptor-mediated endocytosis (GO:0006898)
[1153 PDB entries]

clathrin-dependent endocytosis (GO:0072583)
[49 PDB entries]
endocytic hemoglobin import (GO:0020028)
[3 PDB entries]
negative regulation of receptor-mediated endocytosis (GO:0048261)
[66 PDB entries]
positive regulation of receptor-mediated endocytosis (GO:0048260)
[1034 PDB entries]
receptor internalization (GO:0031623)
[585 PDB entries]
receptor-mediated endocytosis involved in cholesterol transport (GO:0090118)
[16 PDB entries]
receptor-mediated endocytosis of virus by host cell (GO:0019065)
[455 PDB entries]
regulation of receptor-mediated endocytosis (GO:0048259)
[22 PDB entries]

regulation of endocytosis (GO:0030100)
[289 PDB entries]

negative regulation of endocytosis (GO:0045806)
[76 PDB entries]

negative regulation of caveolin-mediated endocytosis (GO:2001287)
[5 PDB entries]
negative regulation of phagocytosis (GO:0050765)
[68 PDB entries]
negative regulation of pinocytosis (GO:0048550)
[52 PDB entries]
negative regulation of receptor-mediated endocytosis (GO:0048261)
[66 PDB entries]
negative regulation of synaptic vesicle endocytosis (GO:1900243)
negative regulation of ubiquitin-dependent endocytosis (GO:2000396)

positive regulation of endocytosis (GO:0045807)
[114 PDB entries]

positive regulation of caveolin-mediated endocytosis (GO:2001288)
[9 PDB entries]
positive regulation of phagocytosis (GO:0050766)
[375 PDB entries]
positive regulation of pinocytosis (GO:0048549)
[10 PDB entries]
positive regulation of receptor-mediated endocytosis (GO:0048260)
[1034 PDB entries]
positive regulation of synaptic vesicle endocytosis (GO:1900244)
[7 PDB entries]
positive regulation of ubiquitin-dependent endocytosis (GO:2000397)
[16 PDB entries]

regulation of caveolin-mediated endocytosis (GO:2001286)
[153 PDB entries]
regulation of endocytosis by exocyst localization (GO:0051600)
regulation of phagocytosis (GO:0050764)
[133 PDB entries]
regulation of pinocytosis (GO:0048548)
regulation of receptor-mediated endocytosis (GO:0048259)
[22 PDB entries]
regulation of synaptic vesicle endocytosis (GO:1900242)
[3 PDB entries]
regulation of ubiquitin-dependent endocytosis (GO:2000395)

sperm entry (GO:0035037)
[6 PDB entries]
ubiquitin-dependent endocytosis (GO:0070086)
[3 PDB entries]

negative regulation of ubiquitin-dependent endocytosis (GO:2000396)
positive regulation of ubiquitin-dependent endocytosis (GO:2000397)
[16 PDB entries]
regulation of ubiquitin-dependent endocytosis (GO:2000395)

vesicle scission involved in endocytosis (GO:0099051)
- vesicle scission involved in clathrin-mediated endocytosis (GO:0099052)

import across plasma membrane (GO:0098739)
- adenine import across plasma membrane (GO:0098702)
- amino acid import across plasma membrane (GO:0089718)
  - D-aspartate import across plasma membrane (GO:0070779)
    [13 PDB entries]
  - glycine import across plasma membrane (GO:1903804)
    - negative regulation of glycine import across plasma membrane (GO:1900924)
    - positive regulation of glycine import across plasma membrane (GO:1900925)
    - regulation of glycine import across plasma membrane (GO:1900923)
  - L-alanine import across plasma membrane (GO:1904273)
  - L-arginine import across plasma membrane (GO:0097638)
  - L-asparagine import across plasma membrane (GO:1903811)
  - L-aspartate import across plasma membrane (GO:0140009)
  - L-glutamate import across plasma membrane (GO:0098712)
    - glutamate reuptake (GO:0051935)
    - negative regulation of L-glutamate import across plasma membrane (GO:0002037)
    - positive regulation of L-glutamate import across plasma membrane (GO:0002038)
    - regulation of L-glutamate import across plasma membrane (GO:0002036)
      [4 PDB entries]
  - L-glutamine import across plasma membrane (GO:1903803)
  - L-histidine import across plasma membrane (GO:1903810)
  - L-isoleucine import across plasma membrane (GO:1903806)
  - L-lysine import across plasma membrane (GO:0097639)
  - L-ornithine import across plasma membrane (GO:0097640)
  - L-threonine import across plasma membrane (GO:1903807)
  - L-tryptophan import across plasma membrane (GO:1904272)
  - L-tyrosine import across plasma membrane (GO:1903808)
  - L-valine import across plasma membrane (GO:1903805)
  - leucine import across plasma membrane (GO:0098713)
  - methionine import across plasma membrane (GO:1903692)
    [2 PDB entries]
  - proline import across plasma membrane (GO:1905647)
  - regulation of amino acid import across plasma membrane (GO:0010958)
  - serine import across plasma membrane (GO:0098718)
- ammonium import across plasma membrane (GO:0140157)
  - spermidine import across plasma membrane (GO:0140203)
- biotin import across plasma membrane (GO:1905135)
- carbohydrate import across plasma membrane (GO:0098704)
  - fructose import across plasma membrane (GO:1990539)
    [3 PDB entries]
  - glucose import across plasma membrane (GO:0098708)
  - maltose import across plasma membrane (GO:0106081)
  - sorbose import across plasma membrane (GO:1903258)
  - sucrose import across plasma membrane (GO:0106082)
- carcinine import across plasma membrane (GO:1905130)
- dethiobiotin import across plasma membrane (GO:1905136)
- folate import across plasma membrane (GO:1904447)
- guanine import across plasma membrane (GO:0098710)
- heme import across plasma membrane (GO:1904334)
- inorganic ion import across plasma membrane (GO:0099587)
  - inorganic anion import across plasma membrane (GO:0098658)
  - inorganic cation import across plasma membrane (GO:0098659)
- malate import across plasma membrane (GO:0098714)
- malonic acid import across plasma membrane (GO:0098715)
- myo-inositol import across plasma membrane (GO:1904679)
- oligopeptide import across plasma membrane (GO:0140205)
  - dipeptide import across plasma membrane (GO:0140206)
  - tripeptide import across plasma membrane (GO:0140207)
- pantothenate import across plasma membrane (GO:0098717)
- polyamine import across plasma membrane (GO:0140202)
  - spermidine import across plasma membrane (GO:0140203)
- pyridoxal import across plasma membrane (GO:0140204)
- pyridoxine import across plasma membrane (GO:1903075)
- silicic acid import across plasma membrane (GO:0015708)
- succinate import across plasma membrane (GO:0098720)
- thiamine import across plasma membrane (GO:0140125)
- uracil import across plasma membrane (GO:0098721)
  - negative regulation of uracil import across plasma membrane (GO:1905530)
  - positive regulation of uracil import across plasma membrane (GO:1905531)
  - regulation of uracil import across plasma membrane (GO:1905529)
- urea import across plasma membrane (GO:0140201)
neurotransmitter uptake (GO:0001504)
[18 PDB entries]

glycine import across plasma membrane (GO:1903804)
- negative regulation of glycine import across plasma membrane (GO:1900924)
- positive regulation of glycine import across plasma membrane (GO:1900925)
- regulation of glycine import across plasma membrane (GO:1900923)
histamine uptake (GO:0051615)
- negative regulation of histamine uptake (GO:0051617)
- positive regulation of histamine uptake (GO:0051618)
- regulation of histamine uptake (GO:0051616)
L-aspartate import across plasma membrane (GO:0140009)
L-glutamate import across plasma membrane (GO:0098712)
- glutamate reuptake (GO:0051935)
- negative regulation of L-glutamate import across plasma membrane (GO:0002037)
- positive regulation of L-glutamate import across plasma membrane (GO:0002038)
- regulation of L-glutamate import across plasma membrane (GO:0002036)
  [4 PDB entries]
negative regulation of neurotransmitter uptake (GO:0051581)
- inhibition of neurotransmitter uptake (GO:0051609)
  [146 PDB entries]
- negative regulation of amino acid uptake involved in synaptic transmission (GO:0051942)
- negative regulation of catecholamine uptake involved in synaptic transmission (GO:0051945)
- negative regulation of glycine import across plasma membrane (GO:1900924)
- negative regulation of histamine uptake (GO:0051617)
- negative regulation of L-glutamate import across plasma membrane (GO:0002037)
- negative regulation of serotonin uptake (GO:0051612)
  [38 PDB entries]
neurotransmitter reuptake (GO:0098810)
- amino acid neurotransmitter reuptake (GO:0051933)
- catecholamine uptake involved in synaptic transmission (GO:0051934)
- serotonin uptake (GO:0051610)
  [6 PDB entries]
positive regulation of neurotransmitter uptake (GO:0051582)
[14 PDB entries]

positive regulation of amino acid uptake involved in synaptic transmission (GO:0051943)
positive regulation of catecholamine uptake involved in synaptic transmission (GO:0051944)
positive regulation of glycine import across plasma membrane (GO:1900925)
positive regulation of histamine uptake (GO:0051618)
positive regulation of L-glutamate import across plasma membrane (GO:0002038)
positive regulation of serotonin uptake (GO:0051613)

regulation of neurotransmitter uptake (GO:0051580)
- negative regulation of neurotransmitter uptake (GO:0051581)
  - inhibition of neurotransmitter uptake (GO:0051609)
    [146 PDB entries]
  - negative regulation of amino acid uptake involved in synaptic transmission (GO:0051942)
  - negative regulation of catecholamine uptake involved in synaptic transmission (GO:0051945)
  - negative regulation of glycine import across plasma membrane (GO:1900924)
  - negative regulation of histamine uptake (GO:0051617)
  - negative regulation of L-glutamate import across plasma membrane (GO:0002037)
  - negative regulation of serotonin uptake (GO:0051612)
    [38 PDB entries]
- positive regulation of neurotransmitter uptake (GO:0051582)
  [14 PDB entries]
- regulation of amino acid uptake involved in synaptic transmission (GO:0051941)
- regulation of catecholamine uptake involved in synaptic transmission (GO:0051940)
- regulation of glycine import across plasma membrane (GO:1900923)
- regulation of histamine uptake (GO:0051616)
- regulation of L-glutamate import across plasma membrane (GO:0002036)
  [4 PDB entries]
- regulation of serotonin uptake (GO:0051611)

Click on the GO accession number to get a tree view of the GO hierarchy without information on PDB entries. In this case your query level and all levels of higher hierarchy up to the root level Gene_Ontology (GO:0003673) are displayed.

If you enter the GO tree somewhere and if you want to get a view of the whole tree first click on the GO name. This yields the low-hierarchy part. Then click on the GO accession number of the lowest hierarchical level. This gives a view of the complete tree. Note, that certain GO terms belong to more than one path.

GO2PDB@JenaLib
Tue Jul 9 10:48:17 2019