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   Search term(s): GO:0072329

Here you see a subgraph of the complete GO graph, with your query GO:0072329 as the highest hiearchical level and all levels of lower hierarchy. The number of PDB entries, for which a UniProt entry annotated with the corresponding GO term is available, is shown in square brackets for all hiearchical levels of the subgraph.

• monocarboxylic acid catabolic process (GO:0072329)
  • (R)-4-hydroxymandelate catabolic process (GO:0019599)
  • (R)-mevalonic acid catabolic process (GO:1901736)
  • 1,6-anhydro-N-acetyl-beta-muramic acid catabolic process (GO:0097175)
    [8 PDB entries]
    
    
  • 1-aminocyclopropane-1-carboxylate catabolic process (GO:0042217)
  • 2,4,5-trichlorophenoxyacetic acid catabolic process (GO:0046228)
  • 2,4-dichlorobenzoate catabolic process (GO:0046298)
  • 2,4-dichlorophenoxyacetic acid catabolic process (GO:0046300)
    [2 PDB entries]
    
    
  • 3,4-dihydroxybenzoate catabolic process (GO:0019619)
    [61 PDB entries]
    
    
  • protocatechuate catabolic process, meta-cleavage (GO:0019617)
  • protocatechuate catabolic process, ortho-cleavage (GO:0019618)
  • 3-(2,3-dihydroxyphenyl)propanoate catabolic process (GO:1901791)
  • 3-(3-hydroxy)phenylpropionate catabolic process (GO:0019622)
    [1 PDB entries]
    
    
  • 3-(3-hydroxyphenyl)propanoate catabolic process (GO:1901794)
  • 3-hydroxyphenylacetate catabolic process (GO:0019610)
  • 3-phenylpropionate catabolic process (GO:0019380)
    [3 PDB entries]
    
    
  • 4-hydroxyphenylacetate catabolic process (GO:1901023)
    [4 PDB entries]
    
    
  • 4-toluenecarboxylate catabolic process (GO:0019612)
  • abscisic acid catabolic process (GO:0046345)
  • acetate catabolic process (GO:0045733)
    [18 PDB entries]
    
    
  • acetate catabolic process to butyrate, ethanol, acetone and butanol (GO:0010123)
  • negative regulation of acetate catabolic process (GO:0045753)
  • positive regulation of acetate catabolic process (GO:0045754)
    • initiation of acetate catabolic process (GO:0043077)
    • positive regulation of initiation of acetate catabolic process by acetate (GO:0045756)
  • regulation of acetate catabolic process (GO:0045734)
    • negative regulation of acetate catabolic process (GO:0045753)
    • positive regulation of acetate catabolic process (GO:0045754)
      • initiation of acetate catabolic process (GO:0043077)
      • positive regulation of initiation of acetate catabolic process by acetate (GO:0045756)
    • regulation of initiation of acetate catabolic process by acetate (GO:0045147)
  • aldonic acid catabolic process (GO:0046176)
    [8 PDB entries]
    
    
  • 2-dehydro-3-deoxy-D-gluconic acid catabolic process (GO:1901273)
  • D-gluconate catabolic process (GO:0046177)
    [6 PDB entries]
    
    
  • galactonate catabolic process (GO:0019584)
    • D-galactonate catabolic process (GO:0034194)
      [7 PDB entries]
      
      
    • L-galactonate catabolic process (GO:0034195)
  • ketogluconate catabolic process (GO:0046181)
    • keto-D-gluconate catabolic process (GO:0019524)
  • L-idonate catabolic process (GO:0046183)
  • anthranilate catabolic process (GO:0043421)
  • arsonoacetate catabolic process (GO:0019501)
  • asparagine catabolic process (GO:0006530)
    • asparagine catabolic process via 2-oxosuccinamate (GO:0033346)
    • asparagine catabolic process via L-aspartate (GO:0033345)
      [20 PDB entries]
      
      
  • benzoate catabolic process (GO:0043639)
    [36 PDB entries]
    
    
  • benzoate catabolic process via CoA ligation (GO:0010128)
  • benzoate catabolic process via hydroxylation (GO:0043640)
    [36 PDB entries]
    
    
  • bile acid catabolic process (GO:0030573)
    [27 PDB entries]
    
    
  • biotin catabolic process (GO:0042367)
  • chrysobactin catabolic process (GO:0042859)
  • cinnamic acid catabolic process (GO:0046281)
    [10 PDB entries]
    
    
  • cspyrone B1 catabolic process (GO:1900801)
  • dermatan sulfate catabolic process (GO:0030209)
    [11 PDB entries]
    
    
  • ectoine catabolic process (GO:0042400)
    [2 PDB entries]
    
    
  • endocrocin catabolic process (GO:1900601)
  • fatty acid catabolic process (GO:0009062)
    [97 PDB entries]
    
    
  • anaerobic fatty acid catabolic process (GO:1990486)
  • butyryl-CoA catabolic process (GO:0044580)
    • butyryl-CoA catabolic process to butanol (GO:0044582)
    • butyryl-CoA catabolic process to butyrate (GO:0044581)
  • fatty acid alpha-oxidation (GO:0001561)
    [10 PDB entries]
    
    
  • fatty acid beta-oxidation (GO:0006635)
    [167 PDB entries]
    
    
  • fatty acid beta-oxidation using acyl-CoA dehydrogenase (GO:0033539)
    [42 PDB entries]
    
    
  • fatty acid beta-oxidation using acyl-CoA oxidase (GO:0033540)
    [11 PDB entries]
    
    
  • fatty acid beta-oxidation, unsaturated, even number (GO:0033542)
  • fatty acid beta-oxidation, unsaturated, odd number (GO:0033541)
  • negative regulation of fatty acid beta-oxidation (GO:0031999)
    [45 PDB entries]
    
    
  • positive regulation of fatty acid beta-oxidation (GO:0032000)
    [71 PDB entries]
    
    
  • regulation of fatty acid beta-oxidation (GO:0031998)
    [22 PDB entries]
    
    
  • lipoate catabolic process (GO:0032323)
  • long-chain fatty acid catabolic process (GO:0042758)
    • leukotriene A4 catabolic process (GO:1901752)
    • leukotriene B4 catabolic process (GO:0036101)
    • palmitic acid catabolic process (GO:1900534)
  • medium-chain fatty acid catabolic process (GO:0051793)
    [6 PDB entries]
    
    
  • monounsaturated fatty acid catabolic process (GO:1903965)
  • prostaglandin catabolic process (GO:1905344)
    • negative regulation of prostaglandin catabolic process (GO:1905829)
    • positive regulation of prostaglandin catabolic process (GO:1905830)
    • regulation of prostaglandin catabolic process (GO:1905828)
  • short-chain fatty acid catabolic process (GO:0019626)
    [7 PDB entries]
    
    
  • 2-oxobutyrate catabolic process (GO:0019606)
  • acetoacetic acid catabolic process (GO:0043442)
  • butyrate catabolic process (GO:0046359)
    [2 PDB entries]
    
    
  • propionate catabolic process (GO:0019543)
  • very long-chain fatty acid catabolic process (GO:0042760)
    [2 PDB entries]
    
    
  • ferulate catabolic process (GO:1901067)
    • negative regulation of ferulate catabolic process (GO:1901467)
    • positive regulation of ferulate catabolic process (GO:1901468)
    • regulation of ferulate catabolic process (GO:1901466)
      • negative regulation of ferulate catabolic process (GO:1901467)
      • positive regulation of ferulate catabolic process (GO:1901468)
  • formate catabolic process (GO:0042183)
    [5 PDB entries]
    
    
  • galacturonate catabolic process (GO:0046397)
    • D-galacturonate catabolic process (GO:0019698)
      [2 PDB entries]
      
      
  • gallate catabolic process (GO:0019396)
    [1 PDB entries]
    
    
  • aerobic gallate catabolic process (GO:0042195)
    • gallate catabolic process via 2-pyrone-4,6-dicarboxylate (GO:0019397)
    • gallate catabolic process via gallate dioxygenase activity (GO:0019398)
  • anaerobic gallate catabolic process (GO:0019328)
  • gamma-aminobutyric acid catabolic process (GO:0009450)
    [31 PDB entries]
    
    
  • negative regulation of gamma-aminobutyric acid catabolic process (GO:1901716)
  • positive regulation of gamma-aminobutyric acid catabolic process (GO:1901717)
  • regulation of gamma-aminobutyric acid catabolic process (GO:1901715)
    • negative regulation of gamma-aminobutyric acid catabolic process (GO:1901716)
    • positive regulation of gamma-aminobutyric acid catabolic process (GO:1901717)
  • glucuronate catabolic process (GO:0006064)
    [11 PDB entries]
    
    
  • D-glucuronate catabolic process (GO:0042840)
    [6 PDB entries]
    
    
  • glucuronate catabolic process to xylulose 5-phosphate (GO:0019640)
    [12 PDB entries]
    
    
  • glycolate catabolic process (GO:0046296)
    [6 PDB entries]
    
    
  • glycyrrhetinate catabolic process (GO:1902385)
  • glyoxylate catabolic process (GO:0009436)
    [21 PDB entries]
    
    
  • helvolic acid catabolic process (GO:1900811)
  • homogentisate catabolic process (GO:1902000)
    [1 PDB entries]
    
    
  • indoleacetic acid catabolic process (GO:0042437)
  • lactate catabolic process (GO:1903457)
    • aerobic lactate catabolic process (GO:1990484)
    • anaerobic lactate catabolic process (GO:1990485)
  • mandelate catabolic process (GO:0019596)
    [64 PDB entries]
    
    
  • (R)-mandelate catabolic process to benzoate (GO:0019597)
  • (R)-mandelate catabolic process to catechol (GO:0019598)
  • methylgallate catabolic process (GO:0046276)
  • monensin A catabolic process (GO:1901729)
  • monodictyphenone catabolic process (GO:1900814)
  • nicotinate catabolic process (GO:1901848)
  • o-orsellinic acid catabolic process (GO:1900583)
  • p-cumate catabolic process (GO:1901782)
  • pantothenate catabolic process (GO:0015941)
    [6 PDB entries]
    
    
  • penicillin catabolic process (GO:0042317)
    • benzylpenicillin catabolic process (GO:1901087)
    • negative regulation of penicillin catabolic process (GO:0033248)
    • positive regulation of penicillin catabolic process (GO:0033249)
    • regulation of penicillin catabolic process (GO:0033247)
      • negative regulation of penicillin catabolic process (GO:0033248)
      • positive regulation of penicillin catabolic process (GO:0033249)
  • pentalenolactone catabolic process (GO:1901779)
  • phenylacetate catabolic process (GO:0010124)
    [39 PDB entries]
    
    
  • pyochelin catabolic process (GO:0042865)
  • pyruvate catabolic process (GO:0042867)
    [2 PDB entries]
    
    
  • glycolytic fermentation to propionate (GO:0019657)
  • quinate catabolic process (GO:0019631)
  • retinoic acid catabolic process (GO:0034653)
    [3 PDB entries]
    
    
  • salicylic acid catabolic process (GO:0046244)
  • shikimate catabolic process (GO:0019633)
  • tensidol B catabolic process (GO:1900607)

Click on the GO accession number to get a tree view of the GO hierarchy without information on PDB entries. In this case your query level and all levels of higher hierarchy up to the root level Gene_Ontology (GO:0003673) are displayed.

If you enter the GO tree somewhere and if you want to get a view of the whole tree first click on the GO name. This yields the low-hierarchy part. Then click on the GO accession number of the lowest hierarchical level. This gives a view of the complete tree. Note, that certain GO terms belong to more than one path.

GO2PDB@JenaLib
Tue Jul 9 10:48:17 2019