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   Search term(s): GO:0072175

Here you see a subgraph of the complete GO graph, with your query GO:0072175 as the highest hiearchical level and all levels of lower hierarchy. The number of PDB entries, for which a UniProt entry annotated with the corresponding GO term is available, is shown in square brackets for all hiearchical levels of the subgraph.

• epithelial tube formation (GO:0072175)
  [2 PDB entries]
  
  
• embryonic epithelial tube formation (GO:0001838)
  [18 PDB entries]
  
  
• embryonic heart tube formation (GO:0003144)
  • embryonic heart tube formation via epithelial folding (GO:0003145)
• nephron tubule formation (GO:0072079)
  [34 PDB entries]
  
  
• mesonephric tubule formation (GO:0072172)
  [1 PDB entries]
  
  
• metanephric nephron tubule formation (GO:0072289)
  [5 PDB entries]
  
  
• specification of metanephric nephron tubule identity (GO:0072293)
• pronephric nephron tubule formation (GO:0039006)
• specification of nephron tubule identity (GO:0072081)
• neural tube formation (GO:0001841)
  [22 PDB entries]
  
  
• primary neural tube formation (GO:0014020)
  • neural fold formation (GO:0001842)
    [1 PDB entries]
    
    
  • neural rod cavitation (GO:0014024)
  • neural rod formation (GO:0014023)
  • neural tube closure (GO:0001843)
    [434 PDB entries]
    
    
• roof plate formation (GO:0021509)
• secondary neural tube formation (GO:0014021)
  • secondary neural tube rod cavitation (GO:0014027)
• primary neural tube formation (GO:0014020)
  • neural fold formation (GO:0001842)
    [1 PDB entries]
    
    
  • neural rod cavitation (GO:0014024)
  • neural rod formation (GO:0014023)
  • neural tube closure (GO:0001843)
    [434 PDB entries]
    
    
• secondary neural tube formation (GO:0014021)
  • secondary neural tube rod cavitation (GO:0014027)
• Malpighian tubule bud morphogenesis (GO:0061332)
• mammary gland cord formation (GO:0060616)
• metanephric tubule formation (GO:0072174)
  • metanephric nephron tubule formation (GO:0072289)
    [5 PDB entries]
    
    
  • specification of metanephric nephron tubule identity (GO:0072293)
• negative regulation of epithelial tube formation (GO:1905277)
  • negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation (GO:2000703)
    [5 PDB entries]
    
    
  • negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation (GO:2000734)
    [5 PDB entries]
    
    
  • negative regulation of planar cell polarity pathway involved in neural tube closure (GO:2000168)
• nephric duct formation (GO:0072179)
  [8 PDB entries]
  
  
• BMP signaling pathway involved in nephric duct formation (GO:0071893)
• mesonephric duct formation (GO:0072181)
  [3 PDB entries]
  
  
• otic vesicle formation (GO:0030916)
  [48 PDB entries]
  
  
• otic placode formation (GO:0043049)
  [20 PDB entries]
  
  
• pancreatic bud formation (GO:0061130)
  • pancreas field specification (GO:0061131)
    • pancreas induction (GO:0061132)
• positive regulation of epithelial tube formation (GO:1905278)
  • pancreas induction (GO:0061132)
  • positive regulation of ureteric bud formation (GO:0072107)
    [10 PDB entries]
    
    
• regulation of epithelial tube formation (GO:1905276)
  • negative regulation of epithelial tube formation (GO:1905277)
    • negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation (GO:2000703)
      [5 PDB entries]
      
      
    • negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation (GO:2000734)
      [5 PDB entries]
      
      
    • negative regulation of planar cell polarity pathway involved in neural tube closure (GO:2000168)
  • positive regulation of epithelial tube formation (GO:1905278)
    • pancreas induction (GO:0061132)
    • positive regulation of ureteric bud formation (GO:0072107)
      [10 PDB entries]
      
      
  • regulation of establishment of planar polarity involved in neural tube closure (GO:0090178)
    [1 PDB entries]
    
    
  • regulation of ureteric bud formation (GO:0072106)
    [1 PDB entries]
    
    

Click on the GO accession number to get a tree view of the GO hierarchy without information on PDB entries. In this case your query level and all levels of higher hierarchy up to the root level Gene_Ontology (GO:0003673) are displayed.

If you enter the GO tree somewhere and if you want to get a view of the whole tree first click on the GO name. This yields the low-hierarchy part. Then click on the GO accession number of the lowest hierarchical level. This gives a view of the complete tree. Note, that certain GO terms belong to more than one path.

GO2PDB@JenaLib
Tue Jul 9 10:48:17 2019