GO2PDB - JenaLib

Search term(s): GO:0061844

Here you see a subgraph of the complete GO graph, with your query GO:0061844 as the highest hiearchical level and all levels of lower hierarchy. The number of PDB entries, for which a UniProt entry annotated with the corresponding GO term is available, is shown in square brackets for all hiearchical levels of the subgraph.

antimicrobial humoral immune response mediated by antimicrobial peptide (GO:0061844)
- antimicrobial peptide production (GO:0002775)
  - antibacterial peptide production (GO:0002778)
    [6 PDB entries]
  - antifungal peptide production (GO:0002781)
    - antifungal peptide biosynthetic process (GO:0002783)
    - antifungal peptide secretion (GO:0002782)
    - negative regulation of antifungal peptide production (GO:0002789)
    - positive regulation of antifungal peptide production (GO:0002804)
    - regulation of antifungal peptide production (GO:0002788)
  - antimicrobial peptide biosynthetic process (GO:0002777)
    - antibacterial peptide biosynthetic process (GO:0002780)
      [2 PDB entries]
    - antifungal peptide biosynthetic process (GO:0002783)
    - negative regulation of antimicrobial peptide biosynthetic process (GO:0002806)
    - positive regulation of antimicrobial peptide biosynthetic process (GO:0002807)
    - regulation of antimicrobial peptide biosynthetic process (GO:0002805)
      [5 PDB entries]
  - antimicrobial peptide secretion (GO:0002776)
    [1 PDB entries]
  - negative regulation of antimicrobial peptide production (GO:0002785)
    - negative regulation of antibacterial peptide production (GO:0002787)
      [5 PDB entries]
    - negative regulation of antifungal peptide production (GO:0002789)
    - negative regulation of antimicrobial peptide biosynthetic process (GO:0002806)
    - negative regulation of antimicrobial peptide secretion (GO:0002795)
  - positive regulation of antimicrobial peptide production (GO:0002225)
    - positive regulation of antibacterial peptide production (GO:0002803)
      [10 PDB entries]
    - positive regulation of antifungal peptide production (GO:0002804)
    - positive regulation of antimicrobial peptide biosynthetic process (GO:0002807)
    - positive regulation of antimicrobial peptide secretion (GO:0002796)
  - regulation of antimicrobial peptide production (GO:0002784)
    - negative regulation of antimicrobial peptide production (GO:0002785)
      - negative regulation of antibacterial peptide production (GO:0002787)
        [5 PDB entries]
      - negative regulation of antifungal peptide production (GO:0002789)
      - negative regulation of antimicrobial peptide biosynthetic process (GO:0002806)
      - negative regulation of antimicrobial peptide secretion (GO:0002795)
    - positive regulation of antimicrobial peptide production (GO:0002225)
      - positive regulation of antibacterial peptide production (GO:0002803)
        [10 PDB entries]
      - positive regulation of antifungal peptide production (GO:0002804)
      - positive regulation of antimicrobial peptide biosynthetic process (GO:0002807)
      - positive regulation of antimicrobial peptide secretion (GO:0002796)
    - regulation of antibacterial peptide production (GO:0002786)
    - regulation of antifungal peptide production (GO:0002788)
    - regulation of antimicrobial peptide biosynthetic process (GO:0002805)
      [5 PDB entries]
    - regulation of antimicrobial peptide secretion (GO:0002794)

Click on the GO accession number to get a tree view of the GO hierarchy without information on PDB entries. In this case your query level and all levels of higher hierarchy up to the root level Gene_Ontology (GO:0003673) are displayed.

If you enter the GO tree somewhere and if you want to get a view of the whole tree first click on the GO name. This yields the low-hierarchy part. Then click on the GO accession number of the lowest hierarchical level. This gives a view of the complete tree. Note, that certain GO terms belong to more than one path.

GO2PDB@JenaLib
Tue Jul 9 10:48:17 2019