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   Search term(s): GO:0046394

Here you see a subgraph of the complete GO graph, with your query GO:0046394 as the highest hiearchical level and all levels of lower hierarchy. The number of PDB entries, for which a UniProt entry annotated with the corresponding GO term is available, is shown in square brackets for all hiearchical levels of the subgraph.

• carboxylic acid biosynthetic process (GO:0046394)
  • achromobactin biosynthetic process (GO:0042861)
  • alginic acid biosynthetic process (GO:0042121)
    [44 PDB entries]
    
    
  • amino acid catabolic process to carboxylic acid via Ehrlich pathway (GO:0000948)
    • aromatic amino acid family catabolic process to carboxylic acid via Ehrlich pathway (GO:0000952)
    • branched-chain amino acid catabolic process to carboxylic acid via Ehrlich pathway (GO:0000953)
    • methionine catabolic process to 3-methylthiopropanoate (GO:0000954)
  • bacillithiol biosynthetic process (GO:0071793)
    [6 PDB entries]
    
    
  • carnosine biosynthetic process (GO:0035499)
  • cellular amino acid biosynthetic process (GO:0008652)
    [2143 PDB entries]
    
    
  • alpha-amino acid biosynthetic process (GO:1901607)
    • 1-aminocyclopropane-1-carboxylate biosynthetic process (GO:0042218)
      [7 PDB entries]
      
      
    • 3-cyano-L-alanine biosynthetic process (GO:1903560)
    • 4-hydroxyproline biosynthetic process (GO:0019472)
    • aspartate family amino acid biosynthetic process (GO:0009067)
    • citrulline biosynthetic process (GO:0019240)
      [17 PDB entries]
      
      
    • creatine biosynthetic process (GO:0006601)
      [29 PDB entries]
      
      
    • D-amino acid biosynthetic process (GO:0046437)
      [9 PDB entries]
      
      
    • discadenine biosynthetic process (GO:0034268)
    • erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process (GO:1902223)
    • glutamine family amino acid biosynthetic process (GO:0009084)
    • histidine biosynthetic process (GO:0000105)
      [158 PDB entries]
      
      
    • homocysteine biosynthetic process (GO:0071268)
      [16 PDB entries]
      
      
    • homomethionine biosynthetic process (GO:0033322)
    • isoleucine biosynthetic process (GO:0009097)
      [117 PDB entries]
      
      
    • L-dopa biosynthetic process (GO:1903185)
    • leucine biosynthetic process (GO:0009098)
      [102 PDB entries]
      
      
    • N-alpha,N-alpha,N-alpha-trimethyl-L-histidine biosynthetic process (GO:0052709)
    • ornithine biosynthetic process (GO:0006592)
      [8 PDB entries]
      
      
    • phosphoarginine biosynthetic process (GO:0046312)
    • pyruvate family amino acid biosynthetic process (GO:0009079)
    • sarcosine biosynthetic process (GO:1901054)
    • serine family amino acid biosynthetic process (GO:0009070)
      [16 PDB entries]
      
      
    • stachydrine biosynthetic process (GO:0019503)
    • tryptophan biosynthetic process (GO:0000162)
      [227 PDB entries]
      
      
    • tyrosine biosynthetic process (GO:0006571)
      [53 PDB entries]
      
      
    • valine biosynthetic process (GO:0009099)
      [54 PDB entries]
      
      
  • amino acid salvage (GO:0043102)
    • L-methionine salvage (GO:0071267)
      [6 PDB entries]
      
      
    • proline salvage (GO:0019492)
  • aromatic amino acid family biosynthetic process (GO:0009073)
    [614 PDB entries]
    
    
  • aromatic amino acid family biosynthetic process, prephenate pathway (GO:0009095)
    [5 PDB entries]
    
    
  • histidine biosynthetic process (GO:0000105)
    [158 PDB entries]
    
    
  • para-aminobenzoic acid biosynthetic process (GO:0008153)
  • tryptophan biosynthetic process (GO:0000162)
    [227 PDB entries]
    
    
  • beta-alanine biosynthetic process (GO:0019483)
    [8 PDB entries]
    
    
  • beta-alanine biosynthetic process via 1,3 diaminopropane (GO:0033394)
  • beta-alanine biosynthetic process via 3-hydroxypropionate (GO:0033395)
  • beta-alanine biosynthetic process via 3-ureidopropionate (GO:0033396)
  • branched-chain amino acid biosynthetic process (GO:0009082)
    [186 PDB entries]
    
    
  • isoleucine biosynthetic process (GO:0009097)
    [117 PDB entries]
    
    
  • leucine biosynthetic process (GO:0009098)
    [102 PDB entries]
    
    
  • valine biosynthetic process (GO:0009099)
    [54 PDB entries]
    
    
  • diaminopimelate biosynthetic process (GO:0019877)
    [187 PDB entries]
    
    
  • fructoselysine biosynthetic process (GO:1901282)
  • gamma-aminobutyric acid biosynthetic process (GO:0009449)
    [6 PDB entries]
    
    
  • negative regulation of cellular amino acid biosynthetic process (GO:2000283)
    • negative regulation of cellular amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (GO:1900403)
    • negative regulation of cellular amino acid biosynthetic process by transcription from RNA polymerase II promoter (GO:0100025)
    • negative regulation of citrulline biosynthetic process (GO:1903249)
      [2 PDB entries]
      
      
    • negative regulation of homoserine biosynthetic process (GO:1901711)
    • negative regulation of L-dopa biosynthetic process (GO:1903196)
    • negative regulation of leucine biosynthetic process (GO:2001277)
    • negative regulation of lysine biosynthetic process via aminoadipic acid (GO:1902987)
    • negative regulation of proline biosynthetic process (GO:1902006)
  • positive regulation of cellular amino acid biosynthetic process (GO:2000284)
    • positive regulation of arginine biosynthetic process (GO:1900080)
    • positive regulation of citrulline biosynthetic process (GO:1903250)
    • positive regulation of homoserine biosynthetic process (GO:1901712)
    • positive regulation of L-dopa biosynthetic process (GO:1903197)
      [45 PDB entries]
      
      
    • positive regulation of leucine biosynthetic process (GO:2001278)
      [3 PDB entries]
      
      
    • positive regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine (GO:2001196)
  • regulation of cellular amino acid biosynthetic process (GO:2000282)
    • negative regulation of cellular amino acid biosynthetic process (GO:2000283)
      • negative regulation of cellular amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (GO:1900403)
      • negative regulation of cellular amino acid biosynthetic process by transcription from RNA polymerase II promoter (GO:0100025)
      • negative regulation of citrulline biosynthetic process (GO:1903249)
        [2 PDB entries]
        
        
      • negative regulation of homoserine biosynthetic process (GO:1901711)
      • negative regulation of L-dopa biosynthetic process (GO:1903196)
      • negative regulation of leucine biosynthetic process (GO:2001277)
      • negative regulation of lysine biosynthetic process via aminoadipic acid (GO:1902987)
      • negative regulation of proline biosynthetic process (GO:1902006)
    • positive regulation of cellular amino acid biosynthetic process (GO:2000284)
      • positive regulation of arginine biosynthetic process (GO:1900080)
      • positive regulation of citrulline biosynthetic process (GO:1903250)
      • positive regulation of homoserine biosynthetic process (GO:1901712)
      • positive regulation of L-dopa biosynthetic process (GO:1903197)
        [45 PDB entries]
        
        
      • positive regulation of leucine biosynthetic process (GO:2001278)
        [3 PDB entries]
        
        
      • positive regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine (GO:2001196)
    • regulation of arginine biosynthetic process (GO:1900079)
    • regulation of citrulline biosynthetic process (GO:1903248)
    • regulation of homoserine biosynthetic process (GO:1901710)
      [3 PDB entries]
      
      
    • regulation of L-dopa biosynthetic process (GO:1903195)
    • regulation of leucine biosynthetic process (GO:2001276)
    • regulation of lysine biosynthetic process via aminoadipic acid (GO:1902986)
    • regulation of proline biosynthetic process (GO:1902005)
  • sulfur amino acid biosynthetic process (GO:0000097)
    [59 PDB entries]
    
    
  • cysteine biosynthetic process (GO:0019344)
    [139 PDB entries]
    
    
  • ergothioneine biosynthetic process (GO:0052699)
    [13 PDB entries]
    
    
  • ergothioneine biosynthesis from histidine via N-alpha,N-alpha,N-alpha-trimethyl-L-histidine (GO:0052704)
    [10 PDB entries]
    
    
  • ergothioneine biosynthesis from N-alpha,N-alpha,N-alpha-trimethyl-L-histidine (GO:0052711)
  • homocysteine biosynthetic process (GO:0071268)
    [16 PDB entries]
    
    
  • homomethionine biosynthetic process (GO:0033322)
  • methionine biosynthetic process (GO:0009086)
    [291 PDB entries]
    
    
  • prenylcysteine biosynthetic process (GO:0046311)
  • cellular modified histidine biosynthetic process (GO:0052703)
    • ergothioneine biosynthetic process (GO:0052699)
      [13 PDB entries]
      
      
    • ergothioneine biosynthesis from histidine via N-alpha,N-alpha,N-alpha-trimethyl-L-histidine (GO:0052704)
      [10 PDB entries]
      
      
    • ergothioneine biosynthesis from N-alpha,N-alpha,N-alpha-trimethyl-L-histidine (GO:0052711)
    • hercynylcysteine sulfoxide biosynthetic process (GO:1903253)
    • hercynylselenocysteine biosynthetic process (GO:1903255)
    • selenoneine biosynthetic process (GO:1903257)
  • cephalosporin C biosynthetic process (GO:1901268)
  • dicarboxylic acid biosynthetic process (GO:0043650)
    • 10-formyltetrahydrofolate biosynthetic process (GO:0009257)
      [5 PDB entries]
      
      
    • 5,6,7,8-tetrahydromethanopterin biosynthetic process (GO:1901285)
    • actinorhodin biosynthetic process (GO:1901112)
    • aldaric acid biosynthetic process (GO:0019578)
      • galactarate biosynthetic process (GO:0046357)
      • glucarate biosynthetic process (GO:0019393)
    • aspartate biosynthetic process (GO:0006532)
      [23 PDB entries]
      
      
    • chorismate biosynthetic process (GO:0009423)
      [333 PDB entries]
      
      
    • diaminopimelate biosynthetic process (GO:0019877)
      [187 PDB entries]
      
      
    • dihydrofolate biosynthetic process (GO:0006761)
      [2 PDB entries]
      
      
    • folic acid biosynthetic process (GO:0046656)
      [144 PDB entries]
      
      
    • gibberellin 12 biosynthetic process (GO:0033470)
    • glutamate biosynthetic process (GO:0006537)
      [81 PDB entries]
      
      
    • L-glutamate biosynthetic process (GO:0097054)
      [7 PDB entries]
      
      
    • glutamate catabolic process to oxaloacetate (GO:0019554)
    • Kdo2-lipid A biosynthetic process (GO:0036104)
    • oxalate biosynthetic process (GO:0033610)
    • prephenate(2-) biosynthetic process (GO:1901747)
    • quinolinate biosynthetic process (GO:0019805)
      [54 PDB entries]
      
      
    • negative regulation of quinolinate biosynthetic process (GO:1904985)
    • positive regulation of quinolinate biosynthetic process (GO:1904986)
    • regulation of quinolinate biosynthetic process (GO:1904984)
      [24 PDB entries]
      
      
    • tyrosine catabolic process to fumarate (GO:0019445)
  • folic acid-containing compound biosynthetic process (GO:0009396)
    [191 PDB entries]
    
    
  • dihydrofolate biosynthetic process (GO:0006761)
    [2 PDB entries]
    
    
  • folic acid biosynthetic process (GO:0046656)
    [144 PDB entries]
    
    
  • tetrahydrofolate biosynthetic process (GO:0046654)
    [592 PDB entries]
    
    
  • 10-formyltetrahydrofolate biosynthetic process (GO:0009257)
    [5 PDB entries]
    
    
  • tetrahydrofolylpolyglutamate biosynthetic process (GO:0046901)
    [16 PDB entries]
    
    
  • fumagillin biosynthetic process (GO:1902086)
    • negative regulation of fumagillin biosynthetic process (GO:1902091)
    • positive regulation of fumagillin biosynthetic process (GO:1902092)
    • regulation of fumagillin biosynthetic process (GO:1902090)
      • negative regulation of fumagillin biosynthetic process (GO:1902091)
      • positive regulation of fumagillin biosynthetic process (GO:1902092)
  • fumonisin biosynthetic process (GO:1900541)
    • negative regulation of fumonisin biosynthetic process (GO:1900684)
    • positive regulation of fumonisin biosynthetic process (GO:1900685)
    • regulation of fumonisin biosynthetic process (GO:1900683)
      • negative regulation of fumonisin biosynthetic process (GO:1900684)
      • positive regulation of fumonisin biosynthetic process (GO:1900685)
  • gerfelin biosynthetic process (GO:1900578)
    • negative regulation of gerfelin biosynthetic process (GO:1900687)
    • positive regulation of gerfelin biosynthetic process (GO:1900688)
    • regulation of gerfelin biosynthetic process (GO:1900686)
      • negative regulation of gerfelin biosynthetic process (GO:1900687)
      • positive regulation of gerfelin biosynthetic process (GO:1900688)
  • gibberellin biosynthetic process (GO:0009686)
    [5 PDB entries]
    
    
  • gibberellin 12 biosynthetic process (GO:0033470)
  • negative regulation of gibberellin biosynthetic process (GO:0010373)
  • positive regulation of gibberellin biosynthetic process (GO:0010372)
  • regulation of gibberellin biosynthetic process (GO:0010371)
    [1 PDB entries]
    
    
  • negative regulation of gibberellin biosynthetic process (GO:0010373)
  • positive regulation of gibberellin biosynthetic process (GO:0010372)
  • glucuronoside biosynthetic process (GO:0019390)
  • hyaluronan biosynthetic process (GO:0030213)
    [41 PDB entries]
    
    
  • negative regulation of hyaluronan biosynthetic process (GO:1900126)
    [28 PDB entries]
    
    
  • positive regulation of hyaluronan biosynthetic process (GO:1900127)
    [47 PDB entries]
    
    
  • regulation of hyaluronan biosynthetic process (GO:1900125)
    • negative regulation of hyaluronan biosynthetic process (GO:1900126)
      [28 PDB entries]
      
      
    • positive regulation of hyaluronan biosynthetic process (GO:1900127)
      [47 PDB entries]
      
      
  • icosanoid biosynthetic process (GO:0046456)
    [3 PDB entries]
    
    
  • leukotriene biosynthetic process (GO:0019370)
    [198 PDB entries]
    
    
  • leukotriene A4 biosynthetic process (GO:1901753)
  • leukotriene B4 biosynthetic process (GO:0097251)
  • leukotriene D4 biosynthetic process (GO:1901750)
  • lipoxin biosynthetic process (GO:2001301)
    • lipoxin A4 biosynthetic process (GO:2001303)
      [6 PDB entries]
      
      
    • lipoxin B4 biosynthetic process (GO:2001306)
      [2 PDB entries]
      
      
  • prostanoid biosynthetic process (GO:0046457)
    • prostaglandin biosynthetic process (GO:0001516)
      [254 PDB entries]
      
      
  • keto-3-deoxy-D-manno-octulosonic acid biosynthetic process (GO:0019294)
    [97 PDB entries]
    
    
  • L-ascorbic acid biosynthetic process (GO:0019853)
    [25 PDB entries]
    
    
  • L-ascorbic acid biosynthetic process via GDP-alpha-D-mannose (GO:0090531)
  • L-ascorbic acid biosynthetic process via UDP-alpha-D-glucuronate (GO:0090532)
  • negative regulation of L-ascorbic acid biosynthetic process (GO:2000083)
  • regulation of L-ascorbic acid biosynthetic process (GO:2000082)
    • negative regulation of L-ascorbic acid biosynthetic process (GO:2000083)
  • mannosylglycerate biosynthetic process (GO:0051479)
    [25 PDB entries]
    
    
  • monocarboxylic acid biosynthetic process (GO:0072330)
    • (R)-mandelate catabolic process to benzoate (GO:0019597)
    • (R)-mevalonic acid biosynthetic process (GO:1901737)
      • negative regulation of (R)-mevalonic acid biosynthetic process (GO:0106108)
      • positive regulation of (R)-mevalonic acid biosynthetic process (GO:0106109)
      • regulation of (R)-mevalonic acid biosynthetic process (GO:0106107)
    • 1-aminocyclopropane-1-carboxylate biosynthetic process (GO:0042218)
      [7 PDB entries]
      
      
    • 3,4-dihydroxybenzoate biosynthetic process (GO:0046279)
      [27 PDB entries]
      
      
    • 3-(2,3-dihydroxyphenyl)propanoate biosynthetic process (GO:1901792)
    • 3-(3-hydroxyphenyl)propanoate biosynthetic process (GO:1901795)
    • 4-hydroxyphenylacetate biosynthetic process (GO:1901024)
    • abscisic acid biosynthetic process (GO:0009688)
      [1 PDB entries]
      
      
    • negative regulation of abscisic acid biosynthetic process (GO:0090359)
    • positive regulation of abscisic acid biosynthetic process (GO:0010116)
    • regulation of abscisic acid biosynthetic process (GO:0010115)
    • acetate biosynthetic process (GO:0019413)
      [8 PDB entries]
      
      
    • acetate biosynthetic process from carbon monoxide (GO:0019415)
      [19 PDB entries]
      
      
    • aldonic acid biosynthetic process (GO:0046175)
      • 2-dehydro-3-deoxy-D-gluconic acid biosynthetic process (GO:1901274)
      • cyclic 2,3-bisphospho-D-glycerate biosynthetic process (GO:1901369)
      • D-gluconate biosynthetic process (GO:0046178)
      • ketogluconate biosynthetic process (GO:0046180)
      • L-idonate biosynthetic process (GO:0046182)
    • asparagine biosynthetic process (GO:0006529)
      [12 PDB entries]
      
      
    • asparagine biosynthetic process from cysteine (GO:0019267)
    • asparagine biosynthetic process from oxaloacetate (GO:0019266)
      [1 PDB entries]
      
      
    • L-asparagine biosynthetic process (GO:0070981)
      [3 PDB entries]
      
      
    • bile acid biosynthetic process (GO:0006699)
      [43 PDB entries]
      
      
    • negative regulation of bile acid biosynthetic process (GO:0070858)
      [69 PDB entries]
      
      
    • positive regulation of bile acid biosynthetic process (GO:0070859)
      [5 PDB entries]
      
      
    • regulation of bile acid biosynthetic process (GO:0070857)
      [91 PDB entries]
      
      
    • biotin biosynthetic process (GO:0009102)
      [128 PDB entries]
      
      
    • chrysobactin biosynthetic process (GO:0042858)
    • cinnamic acid biosynthetic process (GO:0009800)
      [18 PDB entries]
      
      
    • cinnamic acid biosynthetic process involved in coumarin metabolism (GO:0010680)
    • cinnamic acid biosynthetic process involved in flavonoid metabolism (GO:0010682)
    • cinnamic acid biosynthetic process involved in salicylic acid metabolism (GO:0010679)
    • cinnamic acid biosynthetic process involved in stilbene metabolism (GO:0010681)
    • clavulanic acid biosynthetic process (GO:0033050)
      [29 PDB entries]
      
      
    • coenzyme B biosynthetic process (GO:0019298)
      [1 PDB entries]
      
      
    • cspyrone B1 biosynthetic process (GO:1900802)
    • dermatan sulfate biosynthetic process (GO:0030208)
    • dethiobiotin biosynthetic process (GO:0019351)
    • ectoine biosynthetic process (GO:0019491)
      [5 PDB entries]
      
      
    • endocrocin biosynthetic process (GO:1900602)
      • negative regulation of endocrocin biosynthetic process (GO:1900668)
      • positive regulation of endocrocin biosynthetic process (GO:1900669)
      • regulation of endocrocin biosynthetic process (GO:1900667)
    • fatty acid biosynthetic process (GO:0006633)
      [1084 PDB entries]
      
      
    • butyryl-CoA biosynthetic process (GO:0044578)
    • fatty acid elongation (GO:0030497)
      [170 PDB entries]
      
      
    • lipoate biosynthetic process (GO:0009107)
      [18 PDB entries]
      
      
    • long-chain fatty acid biosynthetic process (GO:0042759)
      [54 PDB entries]
      
      
    • medium-chain fatty acid biosynthetic process (GO:0051792)
      [7 PDB entries]
      
      
    • methionine catabolic process to 3-methylthiopropanoate (GO:0000954)
    • methyl-branched fatty acid biosynthetic process (GO:1902321)
    • mycolic acid biosynthetic process (GO:0071768)
      [101 PDB entries]
      
      
    • negative regulation of fatty acid biosynthetic process (GO:0045717)
      [96 PDB entries]
      
      
    • oxylipin biosynthetic process (GO:0031408)
      [64 PDB entries]
      
      
    • positive regulation of fatty acid biosynthetic process (GO:0045723)
      [76 PDB entries]
      
      
    • regulation of fatty acid biosynthetic process (GO:0042304)
      [49 PDB entries]
      
      
    • short-chain fatty acid biosynthetic process (GO:0051790)
      [3 PDB entries]
      
      
    • unsaturated fatty acid biosynthetic process (GO:0006636)
      [16 PDB entries]
      
      
    • very long-chain fatty acid biosynthetic process (GO:0042761)
      [1 PDB entries]
      
      
    • ferulate biosynthetic process (GO:0033495)
    • formate biosynthetic process (GO:0015943)
    • galacturonate biosynthetic process (GO:0033481)
      • D-galacturonate biosynthetic process (GO:0033482)
    • gallate biosynthetic process (GO:0046235)
    • gamma-aminobutyric acid biosynthetic process (GO:0009449)
      [6 PDB entries]
      
      
    • glucuronate biosynthetic process (GO:0046399)
      • D-glucuronate biosynthetic process (GO:0042841)
    • glycolate biosynthetic process (GO:0046295)
      [48 PDB entries]
      
      
    • protein deglycation, glyoxal removal (GO:0036529)
    • glycyrrhetinate biosynthetic process (GO:1902386)
    • helvolic acid biosynthetic process (GO:1900812)
      • negative regulation of helvolic acid biosynthetic process (GO:1900841)
      • positive regulation of helvolic acid biosynthetic process (GO:1900842)
      • regulation of helvolic acid biosynthetic process (GO:1900840)
    • indoleacetic acid biosynthetic process (GO:0009684)
      [2 PDB entries]
      
      
    • indoleacetic acid biosynthetic process via tryptophan (GO:0009848)
    • tryptophan-independent indoleacetic acid biosynthetic process (GO:0009849)
    • jasmonic acid biosynthetic process (GO:0009695)
      [27 PDB entries]
      
      
    • regulation of jasmonic acid biosynthetic process (GO:0080141)
      [3 PDB entries]
      
      
    • kynurenic acid biosynthetic process (GO:0034276)
      [12 PDB entries]
      
      
    • L-pipecolic acid biosynthetic process (GO:0062034)
    • lactate biosynthetic process (GO:0019249)
      [113 PDB entries]
      
      
    • D-lactate biosynthetic process from methylglyoxal via (R)-lactaldehyde (GO:0019248)
    • glucose catabolic process to lactate via pyruvate (GO:0019661)
    • lactate biosynthetic process from pyruvate (GO:0019244)
      [1 PDB entries]
      
      
    • protein deglycation, methylglyoxal removal (GO:0036530)
    • mandelate biosynthetic process (GO:0046236)
    • methylgallate biosynthetic process (GO:0046277)
    • monensin A biosynthetic process (GO:1901730)
    • monodictyphenone biosynthetic process (GO:1900815)
      • negative regulation of monodictyphenone biosynthetic process (GO:1900844)
      • positive regulation of monodictyphenone biosynthetic process (GO:1900845)
      • regulation of monodictyphenone biosynthetic process (GO:1900843)
    • nicotinate biosynthetic process (GO:1901849)
    • o-orsellinic acid biosynthetic process (GO:1900584)
      • negative regulation of o-orsellinic acid biosynthetic process (GO:1900699)
      • positive regulation of o-orsellinic acid biosynthetic process (GO:1900700)
      • regulation of o-orsellinic acid biosynthetic process (GO:1900698)
    • olivetolic acid biosynthetic process (GO:1901697)
      [9 PDB entries]
      
      
    • p-cumate biosynthetic process (GO:1901783)
    • pantothenate biosynthetic process (GO:0015940)
      [133 PDB entries]
      
      
    • pantothenate biosynthetic process from 2-dehydropantolactone (GO:0033318)
    • pantothenate biosynthetic process from valine (GO:0033317)
      [7 PDB entries]
      
      
    • para-aminobenzoic acid biosynthetic process (GO:0008153)
    • penicillin biosynthetic process (GO:0042318)
      [39 PDB entries]
      
      
    • benzylpenicillin biosynthetic process (GO:1901088)
    • negative regulation of penicillin biosynthetic process (GO:1900197)
    • positive regulation of penicillin biosynthetic process (GO:1900198)
    • regulation of penicillin biosynthetic process (GO:1900196)
    • pentalenolactone biosynthetic process (GO:1901780)
      [9 PDB entries]
      
      
    • phaseic acid biosynthetic process (GO:0010379)
    • picolinic acid biosynthetic process (GO:1905004)
      [5 PDB entries]
      
      
    • pyochelin biosynthetic process (GO:0042864)
      [6 PDB entries]
      
      
    • pyruvate biosynthetic process (GO:0042866)
      [63 PDB entries]
      
      
    • glycolytic process (GO:0006096)
      [989 PDB entries]
      
      
    • pyruvate biosynthetic process from acetate (GO:0019687)
    • sulphoglycolysis (GO:0061722)
    • quinate biosynthetic process (GO:0042194)
    • retinoic acid biosynthetic process (GO:0002138)
      [19 PDB entries]
      
      
    • 9-cis-retinoic acid biosynthetic process (GO:0042904)
      [3 PDB entries]
      
      
    • negative regulation of retinoic acid biosynthetic process (GO:1900053)
      [43 PDB entries]
      
      
    • positive regulation of retinoic acid biosynthetic process (GO:1900054)
    • regulation of retinoic acid biosynthetic process (GO:1900052)
    • rhizobactin 1021 biosynthetic process (GO:0019289)
    • salicylic acid biosynthetic process (GO:0009697)
      [15 PDB entries]
      
      
    • regulation of salicylic acid biosynthetic process (GO:0080142)
    • shikimate biosynthetic process (GO:0033587)
      [1 PDB entries]
      
      
    • sinapate biosynthetic process (GO:0033497)
    • tensidol B biosynthetic process (GO:1900608)
      • negative regulation of tensidol B biosynthetic process (GO:1900711)
      • positive regulation of tensidol B biosynthetic process (GO:1900712)
      • regulation of tensidol B biosynthetic process (GO:1900710)
  • N-acetylneuraminate biosynthetic process (GO:0046380)
    [4 PDB entries]
    
    
  • ochratoxin A biosynthetic process (GO:1900818)
  • pyrrolysine biosynthetic process (GO:0071524)
    [7 PDB entries]
    
    
  • tatiopterin biosynthetic process (GO:1900870)
    • negative regulation of tatiopterin biosynthetic process (GO:1900975)
    • positive regulation of tatiopterin biosynthetic process (GO:1900976)
    • regulation of tatiopterin biosynthetic process (GO:1900974)
      • negative regulation of tatiopterin biosynthetic process (GO:1900975)
      • positive regulation of tatiopterin biosynthetic process (GO:1900976)
  • tricarboxylic acid biosynthetic process (GO:0072351)
    • 5,6,7,8-tetrahydrosarcinapterin biosynthetic process (GO:1901855)
    • aerobactin biosynthetic process (GO:0019270)
    • coenzyme gamma-F420-2 biosynthetic process (GO:2001121)
    • nicotianamine biosynthetic process (GO:0030418)
      [6 PDB entries]
      
      
    • pyrroloquinoline quinone biosynthetic process (GO:0018189)
      [16 PDB entries]
      
      
    • sarcinapterin biosynthetic process (GO:1900868)
      • negative regulation of sarcinapterin biosynthetic process (GO:1900972)
      • positive regulation of sarcinapterin biosynthetic process (GO:1900973)
      • regulation of sarcinapterin biosynthetic process (GO:1900971)
  • UDP-glucuronate biosynthetic process (GO:0006065)
    [22 PDB entries]
    
    
  • uroporphyrinogen III biosynthetic process (GO:0006780)
    [1 PDB entries]
    
    
  • succinyl-CoA pathway (GO:0006781)

Click on the GO accession number to get a tree view of the GO hierarchy without information on PDB entries. In this case your query level and all levels of higher hierarchy up to the root level Gene_Ontology (GO:0003673) are displayed.

If you enter the GO tree somewhere and if you want to get a view of the whole tree first click on the GO name. This yields the low-hierarchy part. Then click on the GO accession number of the lowest hierarchical level. This gives a view of the complete tree. Note, that certain GO terms belong to more than one path.

GO2PDB@JenaLib
Tue Jul 9 10:48:17 2019