QuickSearch:    by PDB,NDB,UniProt,PROSITE Code or Search Term(s)

   Search term(s): GO:0046173

Here you see a subgraph of the complete GO graph, with your query GO:0046173 as the highest hiearchical level and all levels of lower hierarchy. The number of PDB entries, for which a UniProt entry annotated with the corresponding GO term is available, is shown in square brackets for all hiearchical levels of the subgraph.

• polyol biosynthetic process (GO:0046173)
  • 1,5-anhydro-D-fructose biosynthetic process (GO:1901803)
  • 2-deoxystreptamine biosynthetic process (GO:1901744)
  • alditol biosynthetic process (GO:0019401)
    • glucosylglycerol biosynthetic process (GO:0051473)
    • glycerol biosynthetic process (GO:0006114)
      [13 PDB entries]
      
      
    • glycerol biosynthetic process from pyruvate (GO:0046327)
      [48 PDB entries]
      
      
    • hexitol biosynthetic process (GO:0019406)
      • galactitol biosynthetic process (GO:0019403)
      • mannitol biosynthetic process (GO:0019593)
      • sorbitol biosynthetic process (GO:0006061)
        [145 PDB entries]
        
        
    • pentitol biosynthetic process (GO:0019526)
      • ribitol biosynthetic process (GO:0046362)
  • butirosin biosynthetic process (GO:1901758)
  • calcitriol biosynthetic process from calciol (GO:0036378)
    [40 PDB entries]
    
    
  • diol biosynthetic process (GO:0034312)
    • (+)-secoisolariciresinol biosynthetic process (GO:1902135)
      [1 PDB entries]
      
      
    • (-)-secoisolariciresinol biosynthetic process (GO:1902138)
    • asperfuranone biosynthetic process (GO:1900554)
      • negative regulation of asperfuranone biosynthetic process (GO:1900638)
      • positive regulation of asperfuranone biosynthetic process (GO:1900639)
      • regulation of asperfuranone biosynthetic process (GO:1900637)
    • glycol biosynthetic process (GO:0042845)
      • butanediol biosynthetic process (GO:0034079)
      • phthiocerol biosynthetic process (GO:0097040)
        [6 PDB entries]
        
        
    • sphinganine biosynthetic process (GO:0046511)
    • sphingosine biosynthetic process (GO:0046512)
      [30 PDB entries]
      
      
    • tetrahydrobiopterin biosynthetic process (GO:0006729)
      [143 PDB entries]
      
      
    • verruculogen biosynthetic process (GO:1902181)
      [3 PDB entries]
      
      
  • gentamycin biosynthetic process (GO:1901130)
  • inositol biosynthetic process (GO:0006021)
    [34 PDB entries]
    
    
  • negative regulation of inositol biosynthetic process (GO:1900089)
    • negative regulation of inositol biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (GO:1900471)
    • negative regulation of inositol biosynthetic process by transcription from RNA polymerase II promoter (GO:0100047)
  • positive regulation of inositol biosynthetic process (GO:1900090)
    • positive regulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (GO:1900375)
    • positive regulation of inositol biosynthetic process by transcription from RNA polymerase II promoter (GO:0100015)
  • regulation of inositol biosynthetic process (GO:1900088)
    • negative regulation of inositol biosynthetic process (GO:1900089)
      • negative regulation of inositol biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (GO:1900471)
      • negative regulation of inositol biosynthetic process by transcription from RNA polymerase II promoter (GO:0100047)
    • positive regulation of inositol biosynthetic process (GO:1900090)
      • positive regulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (GO:1900375)
      • positive regulation of inositol biosynthetic process by transcription from RNA polymerase II promoter (GO:0100015)
  • inositol phosphate biosynthetic process (GO:0032958)
    [22 PDB entries]
    
    
  • inositol trisphosphate biosynthetic process (GO:0032959)
    [16 PDB entries]
    
    
  • negative regulation of inositol trisphosphate biosynthetic process (GO:0032961)
  • positive regulation of inositol trisphosphate biosynthetic process (GO:0032962)
    [18 PDB entries]
    
    
  • regulation of inositol trisphosphate biosynthetic process (GO:0032960)
    [22 PDB entries]
    
    
  • myo-inositol hexakisphosphate biosynthetic process (GO:0010264)
    [14 PDB entries]
    
    
  • myo-inositol hexakisphosphate biosynthetic process, lipid-dependent (GO:0033545)
  • myo-inositol hexakisphosphate biosynthetic process, lipid-independent (GO:0033548)
  • negative regulation of inositol phosphate biosynthetic process (GO:0010920)
    [9 PDB entries]
    
    
  • negative regulation of inositol trisphosphate biosynthetic process (GO:0032961)
  • positive regulation of inositol phosphate biosynthetic process (GO:0060732)
    [42 PDB entries]
    
    
  • positive regulation of inositol trisphosphate biosynthetic process (GO:0032962)
    [18 PDB entries]
    
    
  • regulation of inositol phosphate biosynthetic process (GO:0010919)
    • negative regulation of inositol phosphate biosynthetic process (GO:0010920)
      [9 PDB entries]
      
      
    • negative regulation of inositol trisphosphate biosynthetic process (GO:0032961)
    • positive regulation of inositol phosphate biosynthetic process (GO:0060732)
      [42 PDB entries]
      
      
    • positive regulation of inositol trisphosphate biosynthetic process (GO:0032962)
      [18 PDB entries]
      
      
    • regulation of inositol trisphosphate biosynthetic process (GO:0032960)
      [22 PDB entries]
      
      
  • kanamycin biosynthetic process (GO:1901133)
    [10 PDB entries]
    
    
  • neomycin biosynthetic process (GO:1901158)
  • paromomycin biosynthetic process (GO:1901155)
  • phenolic phthiocerol biosynthetic process (GO:0097041)
    [6 PDB entries]
    
    
  • phytosphingosine biosynthetic process (GO:0071602)
  • streptomycin biosynthetic process (GO:0019872)
    [1 PDB entries]
    
    
  • tobramycin biosynthetic process (GO:1901121)
    [10 PDB entries]
    
    

Click on the GO accession number to get a tree view of the GO hierarchy without information on PDB entries. In this case your query level and all levels of higher hierarchy up to the root level Gene_Ontology (GO:0003673) are displayed.

If you enter the GO tree somewhere and if you want to get a view of the whole tree first click on the GO name. This yields the low-hierarchy part. Then click on the GO accession number of the lowest hierarchical level. This gives a view of the complete tree. Note, that certain GO terms belong to more than one path.

GO2PDB@JenaLib
Tue Jul 9 10:48:17 2019