GO2PDB - JenaLib

Search term(s): GO:0044462

Here you see a subgraph of the complete GO graph, with your query GO:0044462 as the highest hiearchical level and all levels of lower hierarchy. The number of PDB entries, for which a UniProt entry annotated with the corresponding GO term is available, is shown in square brackets for all hiearchical levels of the subgraph.

external encapsulating structure part (GO:0044462)
- Bam protein complex (GO:1990063)
  [30 PDB entries]
- cell outer membrane (GO:0009279)
  [651 PDB entries]
- cell wall part (GO:0044426)
  - Casparian strip (GO:0048226)
  - cell septum edging (GO:0043188)
  - cellular birth scar (GO:0071597)
  - cellular bud scar (GO:0005621)
  - cellulose microfibril (GO:0009549)
  - chitosan layer of spore wall (GO:0005631)
  - DIM/DIP cell wall layer (GO:0097735)
  - dityrosine layer of spore wall (GO:0005630)
  - endospore coat (GO:0043593)
  - endospore cortex (GO:0043595)
  - exosporium (GO:0043592)
  - external side of cell wall (GO:0010339)
    - external side of fungal-type cell wall (GO:0070263)
  - filiform apparatus (GO:0043680)
  - glycoprotein network (GO:0048222)
  - hemicellulose network (GO:0048223)
  - inner layer of spore wall (GO:0005632)
  - Isp3 layer of spore wall (GO:1990916)
  - lignin network (GO:0048224)
  - microsporidian-type endospore (GO:0090641)
  - microsporidian-type exospore (GO:0090642)
  - outer endospore membrane (GO:0043594)
    [1 PDB entries]
  - pectic matrix (GO:0048217)
  - perforation plate (GO:1990073)
  - sieve area (GO:0097217)
  - sieve plate (GO:0097218)
    - compound sieve plate (GO:0097219)
    - simple sieve plate (GO:0097220)
  - suberin network (GO:0048225)
- columella (GO:0043674)
- ectexine (GO:0043669)
  - foot layer (GO:0043670)
- endexine (GO:0043671)
- exine (GO:0043668)
  - ectexine (GO:0043669)
    - foot layer (GO:0043670)
  - endexine (GO:0043671)
  - nexine (GO:0043672)
  - sexine (GO:0043673)
    - columella (GO:0043674)
    - sculpture element (GO:0043675)
    - tectum (GO:0043676)
- external side of cell outer membrane (GO:0031240)
  [5 PDB entries]
- extrinsic component of cell outer membrane (GO:0031244)
  - extrinsic component of external side of cell outer membrane (GO:0031242)
    - extrinsic component of external side of mycolate outer membrane (GO:0036421)
  - extrinsic component of mycolate outer membrane (GO:0036420)
    - extrinsic component of external side of mycolate outer membrane (GO:0036421)
  - extrinsic component of periplasmic side of cell outer membrane (GO:0031245)
- foot layer (GO:0043670)
- intine (GO:0043678)
- intrinsic component of cell outer membrane (GO:0031230)
  [8 PDB entries]
- micropyle (GO:0070825)
- nexine (GO:0043672)
- periplasmic side of cell outer membrane (GO:0031241)
  [11 PDB entries]
- pollen aperture (GO:0062074)
- sculpture element (GO:0043675)
- sexine (GO:0043673)
  - columella (GO:0043674)
  - sculpture element (GO:0043675)
  - tectum (GO:0043676)
- starch utilization system complex (GO:0044570)
- tectum (GO:0043676)

Click on the GO accession number to get a tree view of the GO hierarchy without information on PDB entries. In this case your query level and all levels of higher hierarchy up to the root level Gene_Ontology (GO:0003673) are displayed.

If you enter the GO tree somewhere and if you want to get a view of the whole tree first click on the GO name. This yields the low-hierarchy part. Then click on the GO accession number of the lowest hierarchical level. This gives a view of the complete tree. Note, that certain GO terms belong to more than one path.

GO2PDB@JenaLib
Tue Jul 9 10:48:17 2019