GO2PDB - JenaLib

Search term(s): GO:0043933

Here you see a subgraph of the complete GO graph, with your query GO:0043933 as the highest hiearchical level and all levels of lower hierarchy. The number of PDB entries, for which a UniProt entry annotated with the corresponding GO term is available, is shown in square brackets for all hiearchical levels of the subgraph.

protein-containing complex subunit organization (GO:0043933)
- collagen fibril organization (GO:0030199)
  [125 PDB entries]
- intermediate filament polymerization or depolymerization (GO:0045105)
  - intermediate filament depolymerization (GO:0045106)
    - negative regulation of intermediate filament depolymerization (GO:0030843)
    - positive regulation of intermediate filament depolymerization (GO:0030844)
    - regulation of intermediate filament depolymerization (GO:0030842)
  - intermediate filament polymerization (GO:0045107)
    - negative regulation of intermediate filament polymerization (GO:0030840)
    - positive regulation of intermediate filament polymerization (GO:0030841)
    - regulation of intermediate filament polymerization (GO:0030839)
  - regulation of intermediate filament polymerization or depolymerization (GO:0045108)
    - regulation of intermediate filament depolymerization (GO:0030842)
    - regulation of intermediate filament polymerization (GO:0030839)
- kinetochore organization (GO:0051383)
  [19 PDB entries]
- myosin filament organization (GO:0031033)
  [1 PDB entries]
- nuclear pore organization (GO:0006999)
  [34 PDB entries]
- protein-carbohydrate complex subunit organization (GO:0071823)
  - protein-carbohydrate complex assembly (GO:0065006)
    - polysaccharide assembly with MHC class II protein complex (GO:0002506)
      [79 PDB entries]
  - protein-carbohydrate complex disassembly (GO:0032985)
- protein-containing complex assembly (GO:0065003)
  - anaphase-promoting complex assembly (GO:1904824)
  - ankyrin repeat-mediated complex assembly (GO:0071533)
  - apoptosome assembly (GO:0097314)
    - negative regulation of apoptosome assembly (GO:1905101)
    - positive regulation of apoptosome assembly (GO:1905102)
    - regulation of apoptosome assembly (GO:1905100)
  - Atg1/ULK1 kinase complex assembly (GO:1904745)
    - negative regulation of Atg1/ULK1 kinase complex assembly (GO:1905865)
    - positive regulation of Atg1/ULK1 kinase complex assembly (GO:1905866)
    - regulation of Atg1/ULK1 kinase complex assembly (GO:1905864)
  - beta-catenin destruction complex assembly (GO:1904885)
    [98 PDB entries]
  - beta-catenin-TCF complex assembly (GO:1904837)
    [311 PDB entries]
  - C3HC4-type RING finger domain-mediated complex assembly (GO:0071537)
  - cellular protein-containing complex assembly (GO:0034622)
    - activation of transmembrane receptor protein tyrosine kinase activity (GO:0007171)
      [85 PDB entries]
    - axonemal dynein complex assembly (GO:0070286)
    - cargo loading into vesicle (GO:0035459)
      [10 PDB entries]
    - chaperone-mediated protein complex assembly (GO:0051131)
      [243 PDB entries]
    - chloroplast ribulose bisphosphate carboxylase complex assembly (GO:0110102)
    - clathrin coat assembly (GO:0048268)
      [47 PDB entries]
    - COP9 signalosome assembly (GO:0010387)
      [5 PDB entries]
    - cytochrome complex assembly (GO:0017004)
      [69 PDB entries]
    - dense core granule priming (GO:0061789)
    - dosage compensation complex assembly (GO:0042714)
      [1 PDB entries]
    - Dsc E3 ubiquitin ligase complex assembly (GO:1990155)
    - eukaryotic translation initiation factor 3 complex assembly (GO:0070196)
    - eukaryotic translation initiation factor 4F complex assembly (GO:0097010)
      [3 PDB entries]
    - exocyst assembly (GO:0001927)
      [12 PDB entries]
    - Golgi membrane coat protein complex assembly (GO:0048197)
    - Golgi membrane priming complex assembly (GO:0048195)
    - Golgi vesicle prefusion complex stabilization (GO:0048213)
      [1 PDB entries]
    - kinetochore assembly (GO:0051382)
      [45 PDB entries]
    - lipid tube assembly (GO:0060988)
      [15 PDB entries]
    - MBF transcription complex assembly (GO:0120185)
    - MCM complex assembly (GO:0072689)
    - mediator complex assembly (GO:0036034)
    - MHC protein complex assembly (GO:0002396)
    - mitochondrial outer membrane translocase complex assembly (GO:0070096)
      [14 PDB entries]
    - mitochondrial respiratory chain complex assembly (GO:0033108)
      [13 PDB entries]
    - mitochondrial respiratory chain supercomplex assembly (GO:0097250)
    - Mre11 complex assembly (GO:0072685)
    - mRNA cleavage and polyadenylation specificity factor complex assembly (GO:0110105)
    - myosin filament assembly (GO:0031034)
      [48 PDB entries]
    - NAD(P)H dehydrogenase complex assembly (GO:0010275)
    - NADH dehydrogenase complex assembly (GO:0010257)
    - NLRP3 inflammasome complex assembly (GO:0044546)
      [2 PDB entries]
    - nodal receptor complex assembly (GO:0038099)
    - nuclear pore complex assembly (GO:0051292)
      [41 PDB entries]
    - peptide antigen assembly with MHC protein complex (GO:0002501)
    - photosystem I assembly (GO:0048564)
    - photosystem II assembly (GO:0010207)
      [4 PDB entries]
    - posttranslational protein targeting to membrane, docking (GO:0031203)
    - proteasome assembly (GO:0043248)
      [355 PDB entries]
    - protein catenane formation (GO:0018419)
    - protein polymerization (GO:0051258)
      [165 PDB entries]
    - protein-DNA complex assembly (GO:0065004)
      [27 PDB entries]
    - protein-DNA-RNA complex assembly (GO:0001116)
    - proton-transporting two-sector ATPase complex assembly (GO:0070071)
    - respiratory chain complex II assembly (GO:0034552)
    - ribonucleoprotein complex assembly (GO:0022618)
      [82 PDB entries]
    - RNA polymerase I assembly (GO:1990113)
    - RNA polymerase II core complex assembly (GO:1990114)
    - RNA polymerase III assembly (GO:1990115)
    - SAGA complex assembly (GO:0036285)
    - septin ring assembly (GO:0000921)
      [17 PDB entries]
    - signal complex assembly (GO:0007172)
      [171 PDB entries]
    - SMAD protein complex assembly (GO:0007183)
      [86 PDB entries]
    - SNARE complex assembly (GO:0035493)
      [11 PDB entries]
    - SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition (GO:0006617)
      [7 PDB entries]
    - steroid hormone receptor complex assembly (GO:0006463)
      [12 PDB entries]
    - synaptic vesicle priming (GO:0016082)
      [46 PDB entries]
    - transcription factor TFIIIB complex assembly (GO:0070217)
      [1 PDB entries]
    - transforming growth factor beta receptor complex assembly (GO:0007181)
      [2 PDB entries]
    - tubulin complex assembly (GO:0007021)
      [30 PDB entries]
    - voltage-gated calcium channel complex assembly (GO:0070978)
  - chaperone-mediated autophagy translocation complex assembly (GO:1904763)
  - ciliary necklace assembly (GO:1905352)
  - ciliary transition fiber assembly (GO:1905353)
  - COPII vesicle coating (GO:0048208)
    [189 PDB entries]
  - curli assembly (GO:0098775)
  - death-inducing signaling complex assembly (GO:0071550)
    [87 PDB entries]
  - DNA repair complex assembly (GO:0090735)
    - DNA recombinase assembly (GO:0000730)
      [79 PDB entries]
    - DNA recombinase mediator complex assembly (GO:1903871)
  - ESCRT complex assembly (GO:1904895)
    - ESCRT III complex assembly (GO:1904902)
      [2 PDB entries]
  - eukaryotic translation initiation factor 2 complex assembly (GO:1905143)
  - eukaryotic translation initiation factor 2B complex assembly (GO:1905173)
  - exon-exon junction complex assembly (GO:1903040)
  - FACT complex assembly (GO:1905635)
    - negative regulation of FACT complex assembly (GO:1905645)
    - positive regulation of FACT complex assembly (GO:1905646)
    - regulation of FACT complex assembly (GO:1905644)
  - FHA domain-mediated complex assembly (GO:0071530)
  - gamma-tubulin complex assembly (GO:1902481)
  - heterotrimeric G-protein complex assembly (GO:1902605)
  - integrin activation (GO:0033622)
    [70 PDB entries]
  - lateral cortical node assembly (GO:1903359)
  - LRR domain-mediated complex assembly (GO:0071571)
  - mitotic checkpoint complex assembly (GO:1905660)
  - negative regulation of protein complex assembly (GO:0031333)
    [178 PDB entries]
  - NLRP1 inflammasome complex assembly (GO:1904784)
  - NMS complex assembly (GO:0044768)
    - negative regulation of NMS complex assembly (GO:1901720)
      [1 PDB entries]
    - positive regulation of NMS complex assembly (GO:1901721)
    - regulation of NMS complex assembly (GO:1901719)
  - origin recognition complex assembly (GO:1902561)
  - podosome assembly (GO:0071800)
    [5 PDB entries]
  - pore complex assembly (GO:0046931)
    [36 PDB entries]
  - positive regulation of protein complex assembly (GO:0031334)
    [228 PDB entries]
  - protein complex oligomerization (GO:0051259)
    [1182 PDB entries]
  - protein-carbohydrate complex assembly (GO:0065006)
    - polysaccharide assembly with MHC class II protein complex (GO:0002506)
      [79 PDB entries]
  - protein-containing complex assembly involved in synapse maturation (GO:0090126)
    [7 PDB entries]
  - protein-lipid complex assembly (GO:0065005)
    [1 PDB entries]
  - pyroptosome complex assembly (GO:1904270)
  - regulation of protein complex assembly (GO:0043254)
    [313 PDB entries]
  - Rel homology domain-mediated complex assembly (GO:0071531)
  - RING-like zinc finger domain-mediated complex assembly (GO:0071536)
  - RIP homotypic interaction motif-mediated complex assembly (GO:0071552)
  - ripoptosome assembly (GO:0097343)
    [6 PDB entries]
  - SCF complex assembly (GO:0010265)
    [2 PDB entries]
  - SH2 domain-mediated complex assembly (GO:0071538)
  - starch utilization system complex assembly (GO:0044574)
    - negative regulation of starch utilization system complex assembly (GO:1900513)
    - positive regulation of starch utilization system complex assembly (GO:1900514)
    - regulation of starch utilization system complex assembly (GO:1900512)
  - TCR signalosome assembly (GO:0036399)
    [3 PDB entries]
  - TIR domain-mediated complex assembly (GO:0071523)
  - TORC1 complex assembly (GO:1905669)
  - VCP-NPL4-UFD1 AAA ATPase complex assembly (GO:1904210)
    - negative regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly (GO:1904240)
    - positive regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly (GO:1904241)
    - regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly (GO:1904239)
  - Wnt signalosome assembly (GO:1904887)
    [4 PDB entries]
  - Wnt-Frizzled-LRP5/6 complex assembly (GO:1904701)
    - negative regulation of Wnt-Frizzled-LRP5/6 complex assembly (GO:1904723)
      [5 PDB entries]
    - positive regulation of Wnt-Frizzled-LRP5/6 complex assembly (GO:1904712)
    - regulation of Wnt-Frizzled-LRP5/6 complex assembly (GO:1904711)
  - Y-shaped link assembly (GO:1905350)
  - zf-TRAF domain-mediated complex assembly (GO:0071534)
- protein-containing complex disassembly (GO:0032984)
  - autophagosome maturation (GO:0097352)
    [37 PDB entries]
  - beta-catenin destruction complex disassembly (GO:1904886)
    [169 PDB entries]
  - cellular protein complex disassembly (GO:0043624)
    [13 PDB entries]
  - chaperone-mediated autophagy translocation complex disassembly (GO:1904764)
    [40 PDB entries]
  - ESCRT complex disassembly (GO:1904896)
    [3 PDB entries]
  - exon-exon junction complex disassembly (GO:1903259)
    [1 PDB entries]
  - negative regulation of protein complex disassembly (GO:0043242)
    [29 PDB entries]
  - positive regulation of protein complex disassembly (GO:0043243)
    [21 PDB entries]
  - proteasome complex disassembly (GO:1903009)
    - proteasome storage granule disassembly (GO:1902907)
  - protein-carbohydrate complex disassembly (GO:0032985)
  - protein-DNA complex disassembly (GO:0032986)
    [1 PDB entries]
  - protein-DNA-RNA complex disassembly (GO:0001117)
    - transcription ternary complex disassembly (GO:0001118)
  - protein-lipid complex disassembly (GO:0032987)
    - plasma lipoprotein particle disassembly (GO:0071829)
  - regulation of protein complex disassembly (GO:0043244)
    - negative regulation of protein complex disassembly (GO:0043242)
      [29 PDB entries]
    - positive regulation of protein complex disassembly (GO:0043243)
      [21 PDB entries]
    - regulation of autophagosome maturation (GO:1901096)
    - regulation of DNA-templated transcription, termination (GO:0031554)
      [18 PDB entries]
    - regulation of myosin II filament disassembly (GO:0043521)
    - regulation of protein depolymerization (GO:1901879)
      [8 PDB entries]
    - regulation of SNARE complex disassembly (GO:0035495)
    - regulation of translational termination (GO:0006449)
      [57 PDB entries]
  - ribonucleoprotein complex disassembly (GO:0032988)
    - P granule disassembly (GO:1903864)
    - ribosome disassembly (GO:0032790)
      [23 PDB entries]
    - spliceosomal complex disassembly (GO:0000390)
      [5 PDB entries]
    - stress granule disassembly (GO:0035617)
      [25 PDB entries]
  - SCF complex disassembly in response to cadmium stress (GO:1990171)
  - TORC2 complex disassembly (GO:1905670)
- protein-containing complex remodeling (GO:0034367)
  - protein-DNA complex remodeling (GO:0001120)
    - DNA-templated transcriptional open complex formation (GO:0001112)
      [1 PDB entries]
  - protein-DNA-RNA complex remodeling (GO:0001119)
  - protein-lipid complex remodeling (GO:0034368)
    - plasma lipoprotein particle remodeling (GO:0034369)
      [4 PDB entries]
- protein-DNA complex subunit organization (GO:0071824)
  - nucleosome organization (GO:0034728)
    [34 PDB entries]
  - protein-DNA complex assembly (GO:0065004)
    [27 PDB entries]
  - protein-DNA complex disassembly (GO:0032986)
    [1 PDB entries]
  - protein-DNA complex remodeling (GO:0001120)
    - DNA-templated transcriptional open complex formation (GO:0001112)
      [1 PDB entries]
- protein-DNA-RNA complex subunit organization (GO:0001115)
  - protein-DNA-RNA complex assembly (GO:0001116)
  - protein-DNA-RNA complex disassembly (GO:0001117)
    - transcription ternary complex disassembly (GO:0001118)
  - protein-DNA-RNA complex remodeling (GO:0001119)
- protein-lipid complex subunit organization (GO:0071825)
  - plasma lipoprotein particle organization (GO:0071827)
    - plasma lipoprotein particle assembly (GO:0034377)
    - plasma lipoprotein particle disassembly (GO:0071829)
    - plasma lipoprotein particle remodeling (GO:0034369)
      [4 PDB entries]
  - protein-lipid complex assembly (GO:0065005)
    [1 PDB entries]
  - protein-lipid complex disassembly (GO:0032987)
    - plasma lipoprotein particle disassembly (GO:0071829)
  - protein-lipid complex remodeling (GO:0034368)
    - plasma lipoprotein particle remodeling (GO:0034369)
      [4 PDB entries]
- ribonucleoprotein complex subunit organization (GO:0071826)
  - P granule organization (GO:0030719)
    [16 PDB entries]
  - ribonucleoprotein complex assembly (GO:0022618)
    [82 PDB entries]
  - ribonucleoprotein complex disassembly (GO:0032988)
    - P granule disassembly (GO:1903864)
    - ribosome disassembly (GO:0032790)
      [23 PDB entries]
    - spliceosomal complex disassembly (GO:0000390)
      [5 PDB entries]
    - stress granule disassembly (GO:0035617)
      [25 PDB entries]

Click on the GO accession number to get a tree view of the GO hierarchy without information on PDB entries. In this case your query level and all levels of higher hierarchy up to the root level Gene_Ontology (GO:0003673) are displayed.

If you enter the GO tree somewhere and if you want to get a view of the whole tree first click on the GO name. This yields the low-hierarchy part. Then click on the GO accession number of the lowest hierarchical level. This gives a view of the complete tree. Note, that certain GO terms belong to more than one path.

GO2PDB@JenaLib
Tue Jul 9 10:48:17 2019