QuickSearch:    by PDB,NDB,UniProt,PROSITE Code or Search Term(s)

   Search term(s): GO:0034470

Here you see a subgraph of the complete GO graph, with your query GO:0034470 as the highest hiearchical level and all levels of lower hierarchy. The number of PDB entries, for which a UniProt entry annotated with the corresponding GO term is available, is shown in square brackets for all hiearchical levels of the subgraph.

• ncRNA processing (GO:0034470)
  • ncRNA 3'-end processing (GO:0043628)
    [10 PDB entries]
    
    
  • mature miRNA 3'-end processing (GO:0044747)
  • priRNA 3'-end processing (GO:1990431)
  • rRNA 3'-end processing (GO:0031125)
    [10 PDB entries]
    
    
  • endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000461)
    [67 PDB entries]
    
    
  • exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000467)
    [42 PDB entries]
    
    
  • generation of mature 3'-end of 5S rRNA generated by RNA polymerase III (GO:0002107)
  • generation of mature 3'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000468)
  • siRNA 3'-end processing (GO:1990432)
  • snoRNA 3'-end processing (GO:0031126)
    [11 PDB entries]
    
    
  • box C/D snoRNA 3'-end processing (GO:0000494)
    [9 PDB entries]
    
    
  • box H/ACA snoRNA 3'-end processing (GO:0000495)
    [4 PDB entries]
    
    
  • polyadenylation-dependent snoRNA 3'-end processing (GO:0071051)
    [31 PDB entries]
    
    
  • snoRNA 3'-end cleavage (GO:0043145)
  • snoRNA polyadenylation (GO:0071050)
    [8 PDB entries]
    
    
  • snRNA 3'-end processing (GO:0034472)
    [8 PDB entries]
    
    
  • U1 snRNA 3'-end processing (GO:0034473)
    [25 PDB entries]
    
    
  • U2 snRNA 3'-end processing (GO:0034474)
  • U4 snRNA 3'-end processing (GO:0034475)
    [38 PDB entries]
    
    
  • U5 snRNA 3'-end processing (GO:0034476)
    [28 PDB entries]
    
    
  • U6 snRNA 3'-end processing (GO:0034477)
    [1 PDB entries]
    
    
  • tRNA 3'-end processing (GO:0042780)
    [12 PDB entries]
    
    
  • mitochondrial tRNA 3'-end processing (GO:1990180)
    [3 PDB entries]
    
    
  • tRNA 3'-terminal CCA addition (GO:0001680)
    [52 PDB entries]
    
    
  • tRNA 3'-trailer cleavage (GO:0042779)
    [5 PDB entries]
    
    
  • ncRNA 5'-end processing (GO:0034471)
    • rRNA 5'-end processing (GO:0000967)
      [19 PDB entries]
      
      
    • endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000472)
      [19 PDB entries]
      
      
    • exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000465)
      [2 PDB entries]
      
      
    • generation of mature 5'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000477)
    • snRNA 5'-end processing (GO:1990273)
    • tRNA 5'-end processing (GO:0099116)
      • mitochondrial tRNA 5'-end processing (GO:0097745)
      • tRNA 5'-leader removal (GO:0001682)
        [129 PDB entries]
        
        
  • pre-miRNA processing (GO:0031054)
    [96 PDB entries]
    
    
  • negative regulation of pre-miRNA processing (GO:2000632)
  • positive regulation of pre-miRNA processing (GO:2000633)
  • regulation of pre-miRNA processing (GO:2000631)
    • negative regulation of pre-miRNA processing (GO:2000632)
    • positive regulation of pre-miRNA processing (GO:2000633)
  • primary miRNA processing (GO:0031053)
    [63 PDB entries]
    
    
  • negative regulation of primary miRNA processing (GO:2000635)
  • positive regulation of primary miRNA processing (GO:2000636)
  • primary miRNA modification (GO:1990729)
    • primary miRNA methylation (GO:1990744)
      [9 PDB entries]
      
      
  • regulation of primary miRNA processing (GO:2000634)
    • negative regulation of primary miRNA processing (GO:2000635)
    • positive regulation of primary miRNA processing (GO:2000636)
  • rRNA processing (GO:0006364)
    [764 PDB entries]
    
    
  • chloroplast rRNA processing (GO:1901259)
  • cleavage involved in rRNA processing (GO:0000469)
    [7 PDB entries]
    
    
  • endonucleolytic cleavage involved in rRNA processing (GO:0000478)
    [1 PDB entries]
    
    
  • exonucleolytic trimming involved in rRNA processing (GO:0000459)
  • generation of mature 5'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000477)
  • maturation of 2S rRNA (GO:0000475)
    • cleavage between 2S rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) (GO:0000485)
    • cleavage between 5.8S rRNA and 2S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) (GO:0000486)
  • maturation of 4.5S rRNA (GO:0000476)
  • maturation of 5.8S rRNA (GO:0000460)
    [9 PDB entries]
    
    
  • maturation of 5.8S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) (GO:0000487)
  • maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000466)
    [26 PDB entries]
    
    
  • maturation of 5S rRNA (GO:0000481)
    [5 PDB entries]
    
    
  • generation of mature 3'-end of 5S rRNA generated by RNA polymerase III (GO:0002107)
  • maturation of 5S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000482)
  • maturation of LSU-rRNA (GO:0000470)
    [170 PDB entries]
    
    
  • maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) (GO:0000473)
  • maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) (GO:0000488)
  • maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000463)
    [102 PDB entries]
    
    
  • maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S) (GO:0002108)
  • maturation of SSU-rRNA (GO:0030490)
    [47 PDB entries]
    
    
  • maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA) (GO:0000474)
  • maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) (GO:0000489)
  • maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000462)
    [245 PDB entries]
    
    
  • maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S) (GO:0002109)
    [67 PDB entries]
    
    
  • rRNA acetylation involved in maturation of SSU-rRNA (GO:1904812)
  • negative regulation of rRNA processing (GO:2000233)
    [12 PDB entries]
    
    
  • positive regulation of rRNA processing (GO:2000234)
    [3 PDB entries]
    
    
  • regulation of rRNA processing (GO:2000232)
    [9 PDB entries]
    
    
  • negative regulation of rRNA processing (GO:2000233)
    [12 PDB entries]
    
    
  • positive regulation of rRNA processing (GO:2000234)
    [3 PDB entries]
    
    
  • rRNA 3'-end processing (GO:0031125)
    [10 PDB entries]
    
    
  • endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000461)
    [67 PDB entries]
    
    
  • exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000467)
    [42 PDB entries]
    
    
  • generation of mature 3'-end of 5S rRNA generated by RNA polymerase III (GO:0002107)
  • generation of mature 3'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000468)
  • rRNA 5'-end processing (GO:0000967)
    [19 PDB entries]
    
    
  • endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000472)
    [19 PDB entries]
    
    
  • exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000465)
    [2 PDB entries]
    
    
  • generation of mature 5'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000477)
  • rRNA modification (GO:0000154)
    [55 PDB entries]
    
    
  • cotranscriptional mitochondrial rRNA nucleotide insertion (GO:0002110)
  • rRNA acetylation (GO:1990882)
  • rRNA methylation (GO:0031167)
    [178 PDB entries]
    
    
  • rRNA pseudouridine synthesis (GO:0031118)
    [9 PDB entries]
    
    
  • snoRNA release from pre-rRNA (GO:1990417)
  • snoRNA processing (GO:0043144)
    [5 PDB entries]
    
    
  • box C/D snoRNA processing (GO:0034963)
    [8 PDB entries]
    
    
  • box C/D snoRNA 3'-end processing (GO:0000494)
    [9 PDB entries]
    
    
  • intronic box C/D snoRNA processing (GO:0034965)
    [1 PDB entries]
    
    
  • box H/ACA snoRNA processing (GO:0034964)
    [8 PDB entries]
    
    
  • box H/ACA snoRNA 3'-end processing (GO:0000495)
    [4 PDB entries]
    
    
  • intronic box H/ACA snoRNA processing (GO:0034966)
  • intronic snoRNA processing (GO:0031070)
    • intronic box C/D snoRNA processing (GO:0034965)
      [1 PDB entries]
      
      
    • intronic box H/ACA snoRNA processing (GO:0034966)
  • negative regulation of snoRNA processing (GO:1902797)
  • positive regulation of snoRNA processing (GO:1902798)
  • regulation of snoRNA processing (GO:1902796)
    • negative regulation of snoRNA processing (GO:1902797)
    • positive regulation of snoRNA processing (GO:1902798)
  • snoRNA 3'-end processing (GO:0031126)
    [11 PDB entries]
    
    
  • box C/D snoRNA 3'-end processing (GO:0000494)
    [9 PDB entries]
    
    
  • box H/ACA snoRNA 3'-end processing (GO:0000495)
    [4 PDB entries]
    
    
  • polyadenylation-dependent snoRNA 3'-end processing (GO:0071051)
    [31 PDB entries]
    
    
  • snoRNA 3'-end cleavage (GO:0043145)
  • snoRNA polyadenylation (GO:0071050)
    [8 PDB entries]
    
    
  • snoRNA splicing (GO:0034247)
    [6 PDB entries]
    
    
  • snRNA processing (GO:0016180)
    [13 PDB entries]
    
    
  • snRNA 3'-end processing (GO:0034472)
    [8 PDB entries]
    
    
  • U1 snRNA 3'-end processing (GO:0034473)
    [25 PDB entries]
    
    
  • U2 snRNA 3'-end processing (GO:0034474)
  • U4 snRNA 3'-end processing (GO:0034475)
    [38 PDB entries]
    
    
  • U5 snRNA 3'-end processing (GO:0034476)
    [28 PDB entries]
    
    
  • U6 snRNA 3'-end processing (GO:0034477)
    [1 PDB entries]
    
    
  • snRNA 5'-end processing (GO:1990273)
  • tRNA processing (GO:0008033)
    [818 PDB entries]
    
    
  • endonucleolytic cleavage involved in tRNA processing (GO:1905267)
    • tRNA 3'-trailer cleavage, endonucleolytic (GO:0034414)
      [8 PDB entries]
      
      
  • mitochondrial tRNA processing (GO:0090646)
    [7 PDB entries]
    
    
  • mitochondrial tRNA 3'-end processing (GO:1990180)
    [3 PDB entries]
    
    
  • mitochondrial tRNA 5'-end processing (GO:0097745)
  • mitochondrial tRNA modification (GO:0070900)
  • negative regulation of tRNA processing (GO:2000236)
  • positive regulation of tRNA processing (GO:2000237)
    • positive regulation of tRNA methylation (GO:0110004)
  • regulation of tRNA processing (GO:2000235)
    [3 PDB entries]
    
    
  • negative regulation of tRNA processing (GO:2000236)
  • positive regulation of tRNA processing (GO:2000237)
    • positive regulation of tRNA methylation (GO:0110004)
  • regulation of tRNA methylation (GO:0110002)
  • tRNA 3'-end processing (GO:0042780)
    [12 PDB entries]
    
    
  • mitochondrial tRNA 3'-end processing (GO:1990180)
    [3 PDB entries]
    
    
  • tRNA 3'-terminal CCA addition (GO:0001680)
    [52 PDB entries]
    
    
  • tRNA 3'-trailer cleavage (GO:0042779)
    [5 PDB entries]
    
    
  • tRNA 5'-end processing (GO:0099116)
    • mitochondrial tRNA 5'-end processing (GO:0097745)
    • tRNA 5'-leader removal (GO:0001682)
      [129 PDB entries]
      
      
  • tRNA modification (GO:0006400)
    [313 PDB entries]
    
    
  • 2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine-tRNA biosynthesis (GO:0002195)
  • archaeosine-tRNA biosynthetic process (GO:0002927)
  • charged-tRNA amino acid modification (GO:0019988)
    [2 PDB entries]
    
    
  • cyclic threonylcarbamoyladenosine biosynthetic process (GO:0061504)
    [11 PDB entries]
    
    
  • mitochondrial tRNA modification (GO:0070900)
  • tRNA acetylation (GO:0051391)
    [1 PDB entries]
    
    
  • tRNA adenosine deamination to inosine (GO:0140023)
  • tRNA demethylation (GO:1990983)
  • tRNA dihydrouridine synthesis (GO:0002943)
    [13 PDB entries]
    
    
  • tRNA methylation (GO:0030488)
    [160 PDB entries]
    
    
  • tRNA methylthiolation (GO:0035600)
    [3 PDB entries]
    
    
  • tRNA pseudouridine synthesis (GO:0031119)
    [36 PDB entries]
    
    
  • tRNA seleno-modification (GO:0070329)
    [2 PDB entries]
    
    
  • tRNA thio-modification (GO:0034227)
    [20 PDB entries]
    
    
  • tRNA threonylcarbamoyladenosine modification (GO:0002949)
    [25 PDB entries]
    
    
  • tRNA wobble base modification (GO:0002097)
    [6 PDB entries]
    
    
  • tRNA-guanine transglycosylation (GO:0101030)
  • wybutosine biosynthetic process (GO:0031591)
    [11 PDB entries]
    
    
  • tRNA splicing, via endonucleolytic cleavage and ligation (GO:0006388)
    [42 PDB entries]
    
    
  • tRNA exon ligation (GO:0000968)
  • tRNA-type intron splice site recognition and cleavage (GO:0000379)
    [2 PDB entries]
    
    

Click on the GO accession number to get a tree view of the GO hierarchy without information on PDB entries. In this case your query level and all levels of higher hierarchy up to the root level Gene_Ontology (GO:0003673) are displayed.

If you enter the GO tree somewhere and if you want to get a view of the whole tree first click on the GO name. This yields the low-hierarchy part. Then click on the GO accession number of the lowest hierarchical level. This gives a view of the complete tree. Note, that certain GO terms belong to more than one path.

GO2PDB@JenaLib
Tue Jul 9 10:48:17 2019