GO2PDB - JenaLib

Search term(s): GO:0030808

Here you see a subgraph of the complete GO graph, with your query GO:0030808 as the highest hiearchical level and all levels of lower hierarchy. The number of PDB entries, for which a UniProt entry annotated with the corresponding GO term is available, is shown in square brackets for all hiearchical levels of the subgraph.

regulation of nucleotide biosynthetic process (GO:0030808)
- negative regulation of nucleotide biosynthetic process (GO:0030809)
  - negative regulation of 'de novo' NAD biosynthetic process from tryptophan (GO:1905013)
  - negative regulation of purine nucleotide biosynthetic process (GO:1900372)
    - negative regulation of ATP biosynthetic process (GO:2001170)
      [4 PDB entries]
    - negative regulation of butyryl-CoA biosynthetic process from acetyl-CoA (GO:1900495)
    - negative regulation of guanylate cyclase activity (GO:0031283)
      [4 PDB entries]
  - negative regulation of pyrimidine nucleotide biosynthetic process (GO:1900398)
    - negative regulation of dCDP biosynthetic process (GO:1903529)
- positive regulation of nucleotide biosynthetic process (GO:0030810)
  - positive regulation of 'de novo' NAD biosynthetic process from tryptophan (GO:1905014)
  - positive regulation of purine nucleotide biosynthetic process (GO:1900373)
    - positive regulation of ATP biosynthetic process (GO:2001171)
      [61 PDB entries]
    - positive regulation of butyryl-CoA biosynthetic process from acetyl-CoA (GO:1900496)
    - positive regulation of guanylate cyclase activity (GO:0031284)
      [469 PDB entries]
    - positive regulation of purine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (GO:1900418)
    - positive regulation of purine nucleotide biosynthetic process by transcription from RNA polymerase II promoter (GO:0100036)
  - positive regulation of pyrimidine nucleotide biosynthetic process (GO:1900399)
    [1 PDB entries]
- regulation of 'de novo' NAD biosynthetic process from tryptophan (GO:1905012)
  [5 PDB entries]
- regulation of purine nucleotide biosynthetic process (GO:1900371)
  - negative regulation of purine nucleotide biosynthetic process (GO:1900372)
    - negative regulation of ATP biosynthetic process (GO:2001170)
      [4 PDB entries]
    - negative regulation of butyryl-CoA biosynthetic process from acetyl-CoA (GO:1900495)
    - negative regulation of guanylate cyclase activity (GO:0031283)
      [4 PDB entries]
  - positive regulation of purine nucleotide biosynthetic process (GO:1900373)
    - positive regulation of ATP biosynthetic process (GO:2001171)
      [61 PDB entries]
    - positive regulation of butyryl-CoA biosynthetic process from acetyl-CoA (GO:1900496)
    - positive regulation of guanylate cyclase activity (GO:0031284)
      [469 PDB entries]
    - positive regulation of purine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (GO:1900418)
    - positive regulation of purine nucleotide biosynthetic process by transcription from RNA polymerase II promoter (GO:0100036)
  - regulation of acyl-CoA biosynthetic process (GO:0050812)
    [18 PDB entries]
  - regulation of ATP biosynthetic process (GO:2001169)
    - negative regulation of ATP biosynthetic process (GO:2001170)
      [4 PDB entries]
    - positive regulation of ATP biosynthetic process (GO:2001171)
      [61 PDB entries]
    - regulation of glycolytic process (GO:0006110)
      [92 PDB entries]
    - regulation of mitochondrial ATP synthesis coupled proton transport (GO:1905706)
  - regulation of coenzyme A biosynthetic process (GO:0080020)
  - regulation of guanylate cyclase activity (GO:0031282)
    [3 PDB entries]
- regulation of pyrimidine nucleotide biosynthetic process (GO:1900397)
  - negative regulation of pyrimidine nucleotide biosynthetic process (GO:1900398)
    - negative regulation of dCDP biosynthetic process (GO:1903529)
  - positive regulation of pyrimidine nucleotide biosynthetic process (GO:1900399)
    [1 PDB entries]
  - regulation of dCDP biosynthetic process (GO:1903528)
    - negative regulation of dCDP biosynthetic process (GO:1903529)
  - regulation of pyrimidine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (GO:1900448)
  - regulation of pyrimidine nucleotide biosynthetic process by transcription from RNA polymerase II promoter (GO:0100039)
    - regulation of pyrimidine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (GO:1900448)

Click on the GO accession number to get a tree view of the GO hierarchy without information on PDB entries. In this case your query level and all levels of higher hierarchy up to the root level Gene_Ontology (GO:0003673) are displayed.

If you enter the GO tree somewhere and if you want to get a view of the whole tree first click on the GO name. This yields the low-hierarchy part. Then click on the GO accession number of the lowest hierarchical level. This gives a view of the complete tree. Note, that certain GO terms belong to more than one path.

GO2PDB@JenaLib
Tue Jul 9 10:48:17 2019