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   Search term(s): GO:0009713

Here you see a subgraph of the complete GO graph, with your query GO:0009713 as the highest hiearchical level and all levels of lower hierarchy. The number of PDB entries, for which a UniProt entry annotated with the corresponding GO term is available, is shown in square brackets for all hiearchical levels of the subgraph.

• catechol-containing compound biosynthetic process (GO:0009713)
  • (R)-mandelate catabolic process to catechol (GO:0019598)
  • 3,4-dihydroxybenzoate biosynthetic process (GO:0046279)
    [27 PDB entries]
    
    
  • 3-chlorocatechol biosynthetic process (GO:1901169)
  • alkyl caffeate ester biosynthetic process (GO:0090431)
  • catecholamine biosynthetic process (GO:0042423)
    [75 PDB entries]
    
    
  • dopamine biosynthetic process (GO:0042416)
    [74 PDB entries]
    
    
  • dopamine biosynthetic process from tyrosine (GO:0006585)
    [6 PDB entries]
    
    
  • negative regulation of dopamine biosynthetic process (GO:1903180)
  • positive regulation of dopamine biosynthetic process (GO:1903181)
    [45 PDB entries]
    
    
  • regulation of dopamine biosynthetic process (GO:1903179)
  • epinephrine biosynthetic process (GO:0042418)
    [46 PDB entries]
    
    
  • norepinephrine biosynthetic process (GO:0042421)
    [14 PDB entries]
    
    
  • positive regulation of transcription from RNA polymerase II promoter involved in norepinephrine biosynthetic process (GO:2000763)
  • chrysobactin biosynthetic process (GO:0042858)
  • cordyol C biosynthetic process (GO:1900799)
    • negative regulation of cordyol C biosynthetic process (GO:1900862)
    • positive regulation of cordyol C biosynthetic process (GO:1900863)
    • regulation of cordyol C biosynthetic process (GO:1900861)
      • negative regulation of cordyol C biosynthetic process (GO:1900862)
      • positive regulation of cordyol C biosynthetic process (GO:1900863)
  • enterobactin biosynthetic process (GO:0009239)
    [22 PDB entries]
    
    
  • gerfelin biosynthetic process (GO:1900578)
    • negative regulation of gerfelin biosynthetic process (GO:1900687)
    • positive regulation of gerfelin biosynthetic process (GO:1900688)
    • regulation of gerfelin biosynthetic process (GO:1900686)
      • negative regulation of gerfelin biosynthetic process (GO:1900687)
      • positive regulation of gerfelin biosynthetic process (GO:1900688)
  • methylgallate biosynthetic process (GO:0046277)
  • violaceol I biosynthetic process (GO:1900590)
    • negative regulation of violaceol I biosynthetic process (GO:1900714)
    • positive regulation of violaceol I biosynthetic process (GO:1900715)
    • regulation of violaceol I biosynthetic process (GO:1900713)
      • negative regulation of violaceol I biosynthetic process (GO:1900714)
      • positive regulation of violaceol I biosynthetic process (GO:1900715)
  • violaceol II biosynthetic process (GO:1900593)
    • negative regulation of violaceol II biosynthetic process (GO:1900717)
    • positive regulation of violaceol II biosynthetic process (GO:1900718)
    • regulation of violaceol II biosynthetic process (GO:1900716)
      • negative regulation of violaceol II biosynthetic process (GO:1900717)
      • positive regulation of violaceol II biosynthetic process (GO:1900718)

Click on the GO accession number to get a tree view of the GO hierarchy without information on PDB entries. In this case your query level and all levels of higher hierarchy up to the root level Gene_Ontology (GO:0003673) are displayed.

If you enter the GO tree somewhere and if you want to get a view of the whole tree first click on the GO name. This yields the low-hierarchy part. Then click on the GO accession number of the lowest hierarchical level. This gives a view of the complete tree. Note, that certain GO terms belong to more than one path.

GO2PDB@JenaLib
Tue Jul 9 10:48:17 2019