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   Search term(s): GO:0009240

Here you see a subgraph of the complete GO graph, with your query GO:0009240 as the highest hiearchical level and all levels of lower hierarchy. The number of PDB entries, for which a UniProt entry annotated with the corresponding GO term is available, is shown in square brackets for all hiearchical levels of the subgraph.

• isopentenyl diphosphate biosynthetic process (GO:0009240)
  • isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288)
    [225 PDB entries]
    
    
  • isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process (GO:0051484)
    [55 PDB entries]
    
    
  • negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0010323)
    [4 PDB entries]
    
    
  • regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0010322)
    • negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0010323)
      [4 PDB entries]
      
      
  • isopentenyl diphosphate biosynthetic process, mevalonate pathway (GO:0019287)
    [32 PDB entries]
    
    
  • isopentenyl diphosphate biosynthetic process, mevalonate pathway involved in terpenoid biosynthetic process (GO:0051486)
  • negative regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway (GO:2001211)
  • positive regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway (GO:1900486)
  • regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway (GO:2001210)
    • negative regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway (GO:2001211)
    • positive regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway (GO:1900486)

Click on the GO accession number to get a tree view of the GO hierarchy without information on PDB entries. In this case your query level and all levels of higher hierarchy up to the root level Gene_Ontology (GO:0003673) are displayed.

If you enter the GO tree somewhere and if you want to get a view of the whole tree first click on the GO name. This yields the low-hierarchy part. Then click on the GO accession number of the lowest hierarchical level. This gives a view of the complete tree. Note, that certain GO terms belong to more than one path.

GO2PDB@JenaLib
Tue Jul 9 10:48:17 2019