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   Search term(s): GO:0009125

Here you see a subgraph of the complete GO graph, with your query GO:0009125 as the highest hiearchical level and all levels of lower hierarchy. The number of PDB entries, for which a UniProt entry annotated with the corresponding GO term is available, is shown in square brackets for all hiearchical levels of the subgraph.

• nucleoside monophosphate catabolic process (GO:0009125)
  • deoxyribonucleoside monophosphate catabolic process (GO:0009159)
    [29 PDB entries]
    
    
  • purine deoxyribonucleoside monophosphate catabolic process (GO:0009172)
    • dAMP catabolic process (GO:0046059)
    • dGMP catabolic process (GO:0046055)
  • pyrimidine deoxyribonucleoside monophosphate catabolic process (GO:0009178)
    • dCMP catabolic process (GO:0006249)
    • dTMP catabolic process (GO:0046074)
    • dUMP catabolic process (GO:0046079)
      [23 PDB entries]
      
      
  • purine nucleoside monophosphate catabolic process (GO:0009128)
    • purine deoxyribonucleoside monophosphate catabolic process (GO:0009172)
      • dAMP catabolic process (GO:0046059)
      • dGMP catabolic process (GO:0046055)
    • purine ribonucleoside monophosphate catabolic process (GO:0009169)
      • adenosine 5'-(hexahydrogen pentaphosphate) catabolic process (GO:1901911)
      • ADP catabolic process (GO:0046032)
        [2 PDB entries]
        
        
      • AMP catabolic process (GO:0006196)
        [18 PDB entries]
        
        
      • GMP catabolic process (GO:0046038)
        [22 PDB entries]
        
        
      • IMP catabolic process (GO:0006204)
        [7 PDB entries]
        
        
  • pyrimidine nucleoside monophosphate catabolic process (GO:0009131)
    • pyrimidine deoxyribonucleoside monophosphate catabolic process (GO:0009178)
      • dCMP catabolic process (GO:0006249)
      • dTMP catabolic process (GO:0046074)
      • dUMP catabolic process (GO:0046079)
        [23 PDB entries]
        
        
    • pyrimidine ribonucleoside monophosphate catabolic process (GO:0009175)
      • CMP catabolic process (GO:0006248)
      • UMP catabolic process (GO:0046050)
        [1 PDB entries]
        
        
  • ribonucleoside monophosphate catabolic process (GO:0009158)
    [2 PDB entries]
    
    
  • FMN catabolic process (GO:0032363)
  • purine ribonucleoside monophosphate catabolic process (GO:0009169)
    • adenosine 5'-(hexahydrogen pentaphosphate) catabolic process (GO:1901911)
    • ADP catabolic process (GO:0046032)
      [2 PDB entries]
      
      
    • AMP catabolic process (GO:0006196)
      [18 PDB entries]
      
      
    • GMP catabolic process (GO:0046038)
      [22 PDB entries]
      
      
    • IMP catabolic process (GO:0006204)
      [7 PDB entries]
      
      
  • pyrimidine ribonucleoside monophosphate catabolic process (GO:0009175)
    • CMP catabolic process (GO:0006248)
    • UMP catabolic process (GO:0046050)
      [1 PDB entries]
      
      

Click on the GO accession number to get a tree view of the GO hierarchy without information on PDB entries. In this case your query level and all levels of higher hierarchy up to the root level Gene_Ontology (GO:0003673) are displayed.

If you enter the GO tree somewhere and if you want to get a view of the whole tree first click on the GO name. This yields the low-hierarchy part. Then click on the GO accession number of the lowest hierarchical level. This gives a view of the complete tree. Note, that certain GO terms belong to more than one path.

GO2PDB@JenaLib
Tue Jul 9 10:48:17 2019