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   Search term(s): GO:0001130

Here you see a subgraph of the complete GO graph, with your query GO:0001130 as the highest hiearchical level and all levels of lower hierarchy. The number of PDB entries, for which a UniProt entry annotated with the corresponding GO term is available, is shown in square brackets for all hiearchical levels of the subgraph.

• bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding (GO:0001130)
  [3 PDB entries]
  
  
• bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding (GO:0001204)
  [5 PDB entries]
  
  
• bacterial-type RNA polymerase transcriptional activator activity, metal ion regulated sequence-specific DNA binding (GO:0001215)
• bacterial-type RNA polymerase transcriptional repressor activity, metal ion regulated sequence-specific DNA binding (GO:0001218)
  • bacterial-type RNA polymerase transcriptional repressor activity, cadmium ion regulated sequence-specific DNA binding (GO:0001220)
  • bacterial-type RNA polymerase transcriptional repressor activity, copper ion regulated sequence-specific DNA binding (GO:0001219)
• bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding (GO:0001216)
  [1 PDB entries]
  
  
• transcriptional activator activity, bacterial-type RNA polymerase proximal promoter sequence-specific DNA binding (GO:0001140)
  [1 PDB entries]
  
  
• bacterial-type RNA polymerase transcriptional repressor activity, sequence-specific DNA binding (GO:0001217)
  • transcriptional repressor activity, bacterial-type RNA polymerase proximal promoter sequence-specific DNA binding (GO:0001141)
    [51 PDB entries]
    
    
• transcription factor activity, bacterial-type RNA polymerase proximal promoter sequence-specific DNA binding (GO:0001131)
  [13 PDB entries]
  
  
• transcriptional activator activity, bacterial-type RNA polymerase proximal promoter sequence-specific DNA binding (GO:0001140)
  [1 PDB entries]
  
  
• transcriptional repressor activity, bacterial-type RNA polymerase proximal promoter sequence-specific DNA binding (GO:0001141)
  [51 PDB entries]
  
  
• transcription factor activity, bacterial-type RNA polymerase termination site sequence-specific binding (GO:0001149)
• transcription factor activity, bacterial-type RNA polymerase transcription enhancer sequence-specific binding (GO:0001151)

Click on the GO accession number to get a tree view of the GO hierarchy without information on PDB entries. In this case your query level and all levels of higher hierarchy up to the root level Gene_Ontology (GO:0003673) are displayed.

If you enter the GO tree somewhere and if you want to get a view of the whole tree first click on the GO name. This yields the low-hierarchy part. Then click on the GO accession number of the lowest hierarchical level. This gives a view of the complete tree. Note, that certain GO terms belong to more than one path.

GO2PDB@JenaLib
Tue Jul 9 10:48:17 2019