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Title | HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO PRE- TRANSLOCATION AZTMP-TERMINATED DNA (COMPLEX N) | |
PDB code | 1N6Q (PDB summary) | |
NDB code | PD0364 (NDB atlas) | |
Duplex length | 20 base pairs | |
Protein | POL polyprotein [Contains: Protease (Retropepsin) (EC 3.4.23.16); Reverse transcriptase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)], Nuclease|polymerase |
Model | sigma2 / Å2 | Geometrical parameters |
Plane | 0.108 | |
Straight line (x-axis) | 4.516 | |
Arc | 0.352 | Radius of curvature: r = 80 Å |
Kinked line | 0.301 | Kink angle: alpha = 24° Lengths of straight segments: l1 = 9 bp, l2 = 11 bp |
Double kinked line | 0.229 | Kink angles: alpha1 = 20°, alpha2 = 8° Twist angle: omega = -34° Lengths of straight segments: l1 = 8 bp, l2 = 5 bp, l3 = 7 bp |