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Title | HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO POST- TRANSLOCATION AZTMP-TERMINATED DNA (COMPLEX P) | |
PDB code | 1N5Y (PDB summary) | |
NDB code | PD0365 (NDB atlas) | |
Duplex length | 20 base pairs | |
Protein | POL polyprotein [Contains: Protease (Retropepsin) (EC 3.4.23.16); Reverse transcriptase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)], Virus |
Model | sigma2 / Å2 | Geometrical parameters |
Plane | 0.121 | |
Straight line (x-axis) | 4.283 | |
Arc | 0.479 | Radius of curvature: r = 84 Å |
Kinked line | 0.353 | Kink angle: alpha = 25° Lengths of straight segments: l1 = 8 bp, l2 = 12 bp |
Double kinked line | 0.228 | Kink angles: alpha1 = 20°, alpha2 = 11° Twist angle: omega = -31° Lengths of straight segments: l1 = 6 bp, l2 = 6 bp, l3 = 8 bp |