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Title | INHIBITED FRAGMENT OF ETS-1 AND PAIRED DOMAIN OF PAX5 BOUND TO DNA | |
PDB code | 1MDM (PDB summary) | |
NDB code | PD0338 (NDB atlas) | |
Duplex length | 25 base pairs | |
Protein | C-ets-1 protein (p54); Paired box protein Pax-5 (B-cell, Transcription Factor, DNA binding domain: Alpha-helix, DNA binding domain: Winged-helix; helix-turn-helix |
Model | sigma2 / Å2 | Geometrical parameters |
Plane | 0.239 | |
Straight line (x-axis) | 1.488 | |
Arc | 0.574 | Radius of curvature: r = 285 Å |
Kinked line | 0.474 | Kink angle: alpha = 9° Lengths of straight segments: l1 = 14 bp, l2 = 11 bp |
Double kinked line | 0.162 | Kink angles: alpha1 = 13°, alpha2 = 16° Twist angle: omega = -152° Lengths of straight segments: l1 = 8 bp, l2 = 4 bp, l3 = 13 bp |