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Title | SOLUTION STRUCTURE OF THE NON-SEQUENCE-SPECIFIC HMGB PROTEIN NHP6A IN COMPLEX WITH SRY DNA | |
PDB code | 1J5N (PDB summary) | |
NDB code | 1J5N (NDB atlas) | |
Duplex length | 15 base pairs | |
Protein | Nonhistone chromosomal protein 6A, DNA packing/chromatin, DNA binding domain: Alpha-helix |
Model | sigma2 / Å2 | Geometrical parameters |
Plane | 0.101 | |
Straight line (x-axis) | 8.091 | |
Arc | 3.182 | Radius of curvature: r = 49 Å |
Kinked line | 0.419 | Kink angle: alpha = 48° Lengths of straight segments: l1 = 10 bp, l2 = 5 bp |
Double kinked line | 0.455 | Kink angles: alpha1 = 7°, alpha2 = 51° Twist angle: omega = 146° Lengths of straight segments: l1 = 5 bp, l2 = 5 bp, l3 = 5 bp |