|
Title | CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN- CBFBETA CORE DOMAIN HETERODIMER AND C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER | |
PDB code | 1IO4 (PDB summary) | |
NDB code | PD0198 (NDB atlas) | |
Duplex length | 25 base pairs | |
Protein | Aml1/Runx-1 Runt Cbfbeta, Transcription Factor |
Model | sigma2 / Å2 | Geometrical parameters |
Plane | 0.279 | |
Straight line (x-axis) | 1.816 | |
Arc | 0.575 | Radius of curvature: r = 230 Å |
Kinked line | 0.491 | Kink angle: alpha = 12° Lengths of straight segments: l1 = 9 bp, l2 = 16 bp |
Double kinked line | 0.277 | Kink angles: alpha1 = 13°, alpha2 = 7° Twist angle: omega = 100° Lengths of straight segments: l1 = 8 bp, l2 = 8 bp, l3 = 9 bp |