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Title | TONEBP/DNA COMPLEX | |
PDB code | 1IMH (PDB summary) | |
NDB code | PD0214 (NDB atlas) | |
Duplex length | 13 base pairs | |
Protein | Tonicity-responsive enhancer binding protein (TonEBP), also known as NFAT5, Transcription Factor, DNA binding domain: Beta-barrel |
Model | sigma2 / Å2 | Geometrical parameters |
Plane | 0.072 | |
Straight line (x-axis) | 0.209 | |
Arc | 0.188 | Radius of curvature: r = 320 Å |
Kinked line | 0.169 | Kink angle: alpha = 5° Lengths of straight segments: l1 = 5 bp, l2 = 7 bp |
Double kinked line | 0.194 | Kink angles: alpha1 = 10°, alpha2 = 7° Twist angle: omega = -140° Lengths of straight segments: l1 = 4 bp, l2 = 3 bp, l3 = 6 bp |