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Title | DNA-BINDING DOMAIN OF RAP1 IN COMPLEX WITH TELOMERIC DNA SIT | |
PDB code | 1IGN (PDB summary) | |
NDB code | PDT035 (NDB atlas) | |
Duplex length | 18 base pairs | |
Protein | RAP1, Transcription factor, DNA binding domain: Helix-turn-helix, homeodomain |
Model | sigma2 / Å2 | Geometrical parameters |
Plane | 0.128 | |
Straight line (x-axis) | 4.266 | |
Arc | 0.660 | Radius of curvature: r = 82 Å |
Kinked line | 0.315 | Kink angle: alpha = 23° Lengths of straight segments: l1 = 9 bp, l2 = 9 bp |
Double kinked line | 0.259 | Kink angles: alpha1 = 22°, alpha2 = 9° Twist angle: omega = 86° Lengths of straight segments: l1 = 9 bp, l2 = 3 bp, l3 = 6 bp |