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Title | CRYSTAL STRUCTURE OF THE ORPHAN NUCLEAR RECEPTOR REV-ERB(ALP BINDING DOMAIN BOUND TO ITS COGNATE RESPONSE ELEMENT | |
PDB code | 1GA5 (PDB summary) | |
NDB code | PD0191 (NDB atlas) | |
Duplex length | 20 base pairs | |
Protein | Reverb Response Element, Transcription Factor, DNA binding domain: Alpha-helix|beta-barrel |
Model | sigma2 / Å2 | Geometrical parameters |
Plane | 0.245 | |
Straight line (x-axis) | 0.742 | |
Arc | 0.608 | Radius of curvature: r = 414 Å |
Kinked line | 0.554 | Kink angle: alpha = 10° Lengths of straight segments: l1 = 5 bp, l2 = 15 bp |
Double kinked line | 0.377 | Kink angles: alpha1 = 11°, alpha2 = 11° Twist angle: omega = -154° Lengths of straight segments: l1 = 8 bp, l2 = 5 bp, l3 = 7 bp |