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Title | HOMEODOMAIN FROM THE DROSOPHILA PAIRED PROTEIN BOUND TO A DNA OLIGONUCLEOTIDE | |
PDB code | 1FJL (PDB summary) | |
NDB code | PDE025 (NDB atlas) | |
Duplex length | 41 base pairs | |
Protein | Paired protein, Transcription factor, DNA binding domain: Helix-turn-helix, homeodomain |
Model | sigma2 / Å2 | Geometrical parameters |
Plane | 1.654 | |
Straight line (x-axis) | 15.036 | |
Arc | 5.906 | Radius of curvature: r = 220 Å |
Kinked line | 3.436 | Kink angle: alpha = 20° Lengths of straight segments: l1 = 20 bp, l2 = 20 bp |
Double kinked line | 2.521 | Kink angles: alpha1 = 31°, alpha2 = 31° Twist angle: omega = 141° Lengths of straight segments: l1 = 19 bp, l2 = 3 bp, l3 = 19 bp |