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Title | DNA-BINDING MECHANISM OF THE MONOMERIC ORPHAN NUCLEAR RECEPTOR NGFI-B | |
PDB code | 1CIT (PDB summary) | |
NDB code | PD0046 (NDB atlas) | |
Duplex length | 16 base pairs | |
Protein | NGFI-B orphan nuclear receptor, Transcription factor, DNA binding domain: Cys4 zinc finger, nuclear receptor type |
Model | sigma2 / Å2 | Geometrical parameters |
Plane | 0.651 | |
Straight line (x-axis) | 2.276 | |
Arc | 1.394 | Radius of curvature: r = 113 Å |
Kinked line | 1.181 | Kink angle: alpha = 19° Lengths of straight segments: l1 = 5 bp, l2 = 11 bp |
Double kinked line | 0.287 | Kink angles: alpha1 = 24°, alpha2 = 19° Twist angle: omega = 129° Lengths of straight segments: l1 = 5 bp, l2 = 6 bp, l3 = 5 bp |