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Title | EBNA-1 NUCLEAR PROTEIN/DNA COMPLEX | |
PDB code | 1B3T (PDB summary) | |
NDB code | PD0024 (NDB atlas) | |
Duplex length | 18 base pairs | |
Protein | Epstein-Barr virus origin-binding protein (EBNA 1), Replication factor, DNA binding domain: Beta-barrel, alpha-helix |
Model | sigma2 / Å2 | Geometrical parameters |
Plane | 0.896 | |
Straight line (x-axis) | 5.062 | |
Arc | 1.289 | Radius of curvature: r = 71 Å |
Kinked line | 1.255 | Kink angle: alpha = 25° Lengths of straight segments: l1 = 9 bp, l2 = 9 bp |
Double kinked line | 0.196 | Kink angles: alpha1 = 25°, alpha2 = 24° Twist angle: omega = -109° Lengths of straight segments: l1 = 7 bp, l2 = 4 bp, l3 = 7 bp |