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| Title | CRYSTAL STRUCTURES OF THE BACTERIAL RIBOSOMAL DECODING SITE WITH AMIKACIN | |
| Keywords | AMINOGLYCOSIDE, HABA GROUP, RIBOSOMAL DECODING SITE, X-RAY A RNA, AMIKACIN, RNA-ANTIBIOTIC COMPLEX | |
| Experiment | X-ray diffraction | |
| Number of Models | 1 |
| Database | ID code | Status | Coordinate files | ||
| Header | Asymmetric unit | Biological unit | |||
| PDB | 4P20 | released | available | available | Quaternary Structure Server |
| Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
|---|---|---|---|---|---|---|
| 1 | RNA | A | 21 | 449 | 0 | |
| 2 | RNA | B | 21 | 449 | 0 | |
| 3 | Ligand | 5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*U *GP*UP*CP*GP*C)-3' | A | 1 | 0 | 40 |
| 4 | Ligand | 5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*U *GP*UP*CP*GP*C)-3' | B | 1 | 0 | 40 |
| 5 | Water | 75 | 0 | 75 | ||
| total | 119 | 898 | 155 |
| Unit 1 | G2 | C3 | G4 | U5 | C6 | A7 | C8 | A9 | C10 | C11 | G12 | G13 | U14 | G15 | A16 | A17 | G18 | U19 | C20 | G21 | C22 |
| Unit 2 | G24 | C25 | G26 | U27 | C28 | A29 | C30 | A31 | C32 | C33 | G34 | G35 | U36 | G37 | A38 | A39 | G40 | U41 | C42 | G43 | C44 |
| Unit 3 | AKN101 |
| Unit 4 | AKN101 |
Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.
| Go to | [Image Library Home] [Helix Analysis Home] [Image Library Entry] [Helix Analysis Entry] |
| Perl script: | PDBscan.pl (15 Sep 2016) |
| Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |