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Sequence, Chains, Units

Title CRYSTAL STRUCTURE OF THE BACTERIAL RIBOSOMAL DECODING A SITE IN THE PRESENCE OF [CO(NH3)6]CL3
Keywords RIBOSOME, DECODING SITE, RNA
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3BNL     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 22 470 0
2  RNA    B 22 470 0
3  Ligand   A SITE OF BACTERIAL RIBOSOME  A 3 0 21
4  Ligand   A SITE OF BACTERIAL RIBOSOME  B 5 0 35
5 Water     38 0 38
total       90 940 94

Nucleic acids
Unit 1   U1 G2 C3 G4 U5 C6 A7 C8 A9 C10 C11 G12 G13 U14 G15 A16 A17 G18 U19 C20 G21 C22
Unit 2   U1 G2 C3 G4 U5 C6 A7 C8 A9 C10 C11 G12 G13 U14 G15 A16 A17 G18 U19 C20 G21 C22

Ligands
Unit 3   NCO23 NCO24 NCO25
Unit 4   NCO23 NCO24 NCO25 NCO26 NCO27

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany