5VYR - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF THE WBKC FORMYL TRANSFERASE FROM BRUCEL MELITENSIS
• Keywords: N-FORMYLTRANSFERASE, DEOXYSUGAR, TRANSFERASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5VYR	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	GDP-MANNOSE 4,6-DEHYDRATASE / GDP-4-AMINO-4,6-DID MANNOSE FORMYLTRANSFERASE	A	244	1938	0
2	Protein	GDP-MANNOSE 4,6-DEHYDRATASE / GDP-4-AMINO-4,6-DID MANNOSE FORMYLTRANSFERASE	B	245	1936	0
3	Ligand	GDP-MANNOSE 4,6-DEHYDRATASE / GDP-4-AMINO-4,6-DID MANNOSE FORMYLTRANSFERASE	A	4	0	29
4	Ligand	GDP-MANNOSE 4,6-DEHYDRATASE / GDP-4-AMINO-4,6-DID MANNOSE FORMYLTRANSFERASE	B	3	0	44
5	Water			379	0	379
total				875	3874	452

Proteins

Unit 1

ALA 2 ILE 3 ALA 4 PRO 5 ASN 6 THR 7 ARG 8 VAL 9 LEU 10 VAL 11 ALA 12 GLY 13 TYR 14 GLY 15 LEU 16 PRO 17 ALA 18 GLU 19 PHE 20 CYS 21 VAL 22 THR 23 THR 24 LEU 25 ILE 26 GLY 27 MET 28 GLY 29 VAL 30 GLU 31 ILE 32 ASP 33 LYS 34 ILE 35 ALA 36 VAL 37 ALA 38 THR 39 HIS 40 ARG 41 GLU 42 ASP 43 ASN 44 ARG 45 ASN 46 CYS 47 GLY 48 LEU 49 HIS 50 SER 51 MET 52 LEU 53 ARG 54 LEU 55 ARG 56 ASN 57 ILE 58 GLN 59 PHE 60 THR 61 THR 62 ALA 63 ALA 64 ALA 65 ASN 66 SER 67 GLU 68 GLU 69 PHE 70 TYR 71 GLU 72 PHE 73 GLY 74 ALA 75 ASN 76 PHE 77 ALA 78 PRO 79 ASP 80 MET 81 ILE 82 ILE 83 SER 84 MET 85 HIS 86 TYR 87 ARG 88 SER 89 LEU 90 ILE 91 PRO 92 GLY 93 ARG 94 PHE 95 LEU 96 LYS 97 LEU 98 ALA 99 LYS 100 LYS 101 GLY 102 SER 103 VAL 104 ASN 105 LEU 106 HIS 107 PRO 108 SER 109 LEU 110 LEU 111 PRO 112 ALA 113 TYR 114 ARG 115 GLY 116 THR 117 ASN 118 SER 119 VAL 120 ALA 121 TRP 122 VAL 123 ILE 124 ILE 125 ASN 126 GLY 127 GLU 128 SER 129 GLU 130 THR 131 GLY 132 PHE 133 SER 134 TYR 135 HIS 136 ARG 137 MET 138 ASP 139 GLU 140 ASN 141 PHE 142 ASP 143 THR 144 GLY 145 ALA 146 ILE 147 LEU 148 LEU 149 GLN 150 GLU 151 ARG 152 ILE 153 SER 154 VAL 155 GLU 156 GLU 157 THR 158 ASP 159 THR 160 ALA 161 PHE 162 SER 163 LEU 164 PHE 165 HIS 166 ARG 167 GLN 168 ILE 169 ALA 170 ARG 171 ALA 172 MET 173 LEU 174 ARG 175 LEU 176 GLU 177 GLU 178 VAL 179 ILE 180 LEU 181 LYS 182 LEU 183 ASP 184 GLN 185 GLY 186 ASP 187 PRO 188 GLY 189 PHE 190 ALA 191 GLN 192 LEU 193 GLY 194 GLU 195 ALA 196 SER 197 TYR 198 TYR 199 ALA 200 ARG 201 GLU 202 LEU 203 PRO 204 PHE 205 GLY 206 GLY 207 VAL 208 ILE 209 ASP 210 PRO 211 ARG 212 TRP 213 SER 214 GLU 215 VAL 216 GLN 217 ILE 218 ASP 219 ARG 220 PHE 221 ILE 222 ARG 223 ALA 224 MET 225 PHE 226 PHE 227 PRO 228 PRO 229 PHE 230 PRO 231 PRO 232 ALA 233 VAL 234 LEU 235 TYR 242 TYR 243 VAL 244 PRO 245 SER 246 ILE 247 ASP 248 ILE 249 TYR 250 ARG 251

Unit 2

ALA 2 ILE 3 ALA 4 PRO 5 ASN 6 THR 7 ARG 8 VAL 9 LEU 10 VAL 11 ALA 12 GLY 13 TYR 14 GLY 15 LEU 16 PRO 17 ALA 18 GLU 19 PHE 20 CYS 21 VAL 22 THR 23 THR 24 LEU 25 ILE 26 GLY 27 MET 28 GLY 29 VAL 30 GLU 31 ILE 32 ASP 33 LYS 34 ILE 35 ALA 36 VAL 37 ALA 38 THR 39 HIS 40 ARG 41 GLU 42 ASP 43 ASN 44 ARG 45 ASN 46 CYS 47 GLY 48 LEU 49 HIS 50 SER 51 MET 52 LEU 53 ARG 54 LEU 55 ARG 56 ASN 57 ILE 58 GLN 59 PHE 60 THR 61 THR 62 ALA 63 ALA 64 ALA 65 ASN 66 SER 67 GLU 68 GLU 69 PHE 70 TYR 71 GLU 72 PHE 73 GLY 74 ALA 75 ASN 76 PHE 77 ALA 78 PRO 79 ASP 80 MET 81 ILE 82 ILE 83 SER 84 MET 85 HIS 86 TYR 87 ARG 88 SER 89 LEU 90 ILE 91 PRO 92 GLY 93 ARG 94 PHE 95 LEU 96 LYS 97 LEU 98 ALA 99 LYS 100 LYS 101 GLY 102 SER 103 VAL 104 ASN 105 LEU 106 HIS 107 PRO 108 SER 109 LEU 110 LEU 111 PRO 112 ALA 113 TYR 114 ARG 115 GLY 116 THR 117 ASN 118 SER 119 VAL 120 ALA 121 TRP 122 VAL 123 ILE 124 ILE 125 ASN 126 GLY 127 GLU 128 SER 129 GLU 130 THR 131 GLY 132 PHE 133 SER 134 TYR 135 HIS 136 ARG 137 MET 138 ASP 139 GLU 140 ASN 141 PHE 142 ASP 143 THR 144 GLY 145 ALA 146 ILE 147 LEU 148 LEU 149 GLN 150 GLU 151 ARG 152 ILE 153 SER 154 VAL 155 GLU 156 GLU 157 THR 158 ASP 159 THR 160 ALA 161 PHE 162 SER 163 LEU 164 PHE 165 HIS 166 ARG 167 GLN 168 ILE 169 ALA 170 ARG 171 ALA 172 MET 173 LEU 174 ARG 175 LEU 176 GLU 177 GLU 178 VAL 179 ILE 180 LEU 181 LYS 182 LEU 183 ASP 184 GLN 185 GLY 186 ASP 187 PRO 188 GLY 189 PHE 190 ALA 191 GLN 192 LEU 193 GLY 194 GLU 195 ALA 196 SER 197 TYR 198 TYR 199 ALA 200 ARG 201 GLU 202 LEU 203 PRO 204 PHE 205 GLY 206 GLY 207 VAL 208 ILE 209 ASP 210 PRO 211 ARG 212 TRP 213 SER 214 GLU 215 VAL 216 GLN 217 ILE 218 ASP 219 ARG 220 PHE 221 ILE 222 ARG 223 ALA 224 MET 225 PHE 226 PHE 227 PRO 228 PRO 229 PHE 230 PRO 231 PRO 232 ALA 233 VAL 234 LEU 235 LYS 236 ILE 237 ASP 238 GLY 239 LYS 240 VAL 241 TYR 242 TYR 243 VAL 244 PRO 245 SER 246

Ligands

Unit 3	B62 301 EDO 302 CL 303 GMP 304
Unit 4	B62 301 GMP 302 GMP 303