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Sequence, Chains, Asymmetric and Biological Units

Title THE STRUCTURE OF THE FUSED PERMUTED HEXAMERIC SHELL PROTEIN FROM THE RMM MICROCOMPARTMENT
Keywords BACTERIAL MICROCOMPARTMENT, FUSED PERMUTED HEXAMERIC SHELL P STRUCTURAL PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5L39     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   RMM MICROCOMPARTMENT SHELL PROTEIN MSM0275  A 208 1554 0
2  Protein   RMM MICROCOMPARTMENT SHELL PROTEIN MSM0275  B 209 1564 0
3  Protein   RMM MICROCOMPARTMENT SHELL PROTEIN MSM0275  C 196 1469 0
4  Protein   RMM MICROCOMPARTMENT SHELL PROTEIN MSM0275  D 192 1443 0
5  Protein   RMM MICROCOMPARTMENT SHELL PROTEIN MSM0275  E 198 1487 0
6  Protein   RMM MICROCOMPARTMENT SHELL PROTEIN MSM0275  F 202 1514 0
7  Ligand   RMM MICROCOMPARTMENT SHELL PROTEIN MSM0275  A 1 0 1
8  Ligand   RMM MICROCOMPARTMENT SHELL PROTEIN MSM0275  D 1 0 1
9 Water     354 0 354
total       1561 9031 356

Proteins
Unit 1 ALA2 GLU3 LEU4 ARG5 SER6 PHE7 ILE8 PHE9 ILE10 ASP11 ARG12 LEU13 GLN14 PRO15 GLN16 THR17 MET18 SER19 TYR20 LEU21 GLY22 THR23 TRP24 ILE25 LYS26 GLY27 ALA28 LEU29 PRO30 ARG31 ALA32 ASN33 MET34 ALA35 ALA36 GLN37 ILE38 ILE39 GLU40 VAL41 ALA42 PRO43 GLY44 LEU45 ASP46 ILE47 GLU48 GLY49 VAL50 THR51 ASP52 VAL53 ALA54 LEU55 LYS56 HIS57 ALA58 GLU59 VAL60 LYS61 ALA62 GLY63 ILE64 LEU65 VAL66 VAL67 GLU68 ARG69 GLN70 PHE71 GLY72 TYR73 LEU74 GLU75 PHE76 HIS77 GLY78 GLU79 THR80 GLY81 ALA82 VAL83 LYS84 ALA85 ALA86 ALA87 ASP88 ALA89 ALA90 LEU91 ASP92 TYR93 LEU94 GLY95 GLY96 ASP97 PRO98 ASP99 ALA100 ALA101 VAL102 ARG103 PRO104 GLU105 ILE106 LEU107 ALA108 SER109 ARG110 ILE111 ILE112 SER113 SER114 ILE115 ASP116 HIS117 GLN118 HIS119 ALA120 PHE121 LEU122 ILE123 ASN124 ARG125 ASN126 LYS127 ILE128 GLY129 SER130 MET131 VAL132 LEU133 PRO134 GLY135 GLU136 SER137 LEU138 PHE139 VAL140 LEU141 GLU142 VAL143 ALA144 PRO145 ALA146 SER147 TYR148 ALA149 ILE150 LEU151 ALA152 THR153 ASN154 GLU155 ALA156 GLU157 LYS158 ALA159 ALA160 ASP161 VAL162 LYS163 VAL164 VAL165 ASP166 PHE167 ARG168 MET169 ILE170 GLY171 ALA172 THR173 GLY174 ARG175 VAL176 TYR177 LEU178 SER179 GLY180 THR181 GLU182 ALA183 ASP184 VAL185 ARG186 GLN187 ALA188 ALA189 ASP190 ALA191 ALA192 ARG193 ASP194 ALA195 LEU196 ALA197 VAL198 LEU199 GLN200 GLY201 ALA202 LYS203 LEU204 ALA205 ALA206 ALA207 LEU208 GLU209
Unit 2 ALA2 GLU3 LEU4 ARG5 SER6 PHE7 ILE8 PHE9 ILE10 ASP11 ARG12 LEU13 GLN14 PRO15 GLN16 THR17 MET18 SER19 TYR20 LEU21 GLY22 THR23 TRP24 ILE25 LYS26 GLY27 ALA28 LEU29 PRO30 ARG31 ALA32 ASN33 MET34 ALA35 ALA36 GLN37 ILE38 ILE39 GLU40 VAL41 ALA42 PRO43 GLY44 LEU45 ASP46 ILE47 GLU48 GLY49 VAL50 THR51 ASP52 VAL53 ALA54 LEU55 LYS56 HIS57 ALA58 GLU59 VAL60 LYS61 ALA62 GLY63 ILE64 LEU65 VAL66 VAL67 GLU68 ARG69 GLN70 PHE71 GLY72 TYR73 LEU74 GLU75 PHE76 HIS77 GLY78 GLU79 THR80 GLY81 ALA82 VAL83 LYS84 ALA85 ALA86 ALA87 ASP88 ALA89 ALA90 LEU91 ASP92 TYR93 LEU94 GLY95 GLY96 ASP97 PRO98 ASP99 ALA100 ALA101 VAL102 ARG103 PRO104 GLU105 ILE106 LEU107 ALA108 SER109 ARG110 ILE111 ILE112 SER113 SER114 ILE115 ASP116 HIS117 GLN118 HIS119 ALA120 PHE121 LEU122 ILE123 ASN124 ARG125 ASN126 LYS127 ILE128 GLY129 SER130 MET131 VAL132 LEU133 PRO134 GLY135 GLU136 SER137 LEU138 PHE139 VAL140 LEU141 GLU142 VAL143 ALA144 PRO145 ALA146 SER147 TYR148 ALA149 ILE150 LEU151 ALA152 THR153 ASN154 GLU155 ALA156 GLU157 LYS158 ALA159 ALA160 ASP161 VAL162 LYS163 VAL164 VAL165 ASP166 PHE167 ARG168 MET169 ILE170 GLY171 ALA172 THR173 GLY174 ARG175 VAL176 TYR177 LEU178 SER179 GLY180 THR181 GLU182 ALA183 ASP184 VAL185 ARG186 GLN187 ALA188 ALA189 ASP190 ALA191 ALA192 ARG193 ASP194 ALA195 LEU196 ALA197 VAL198 LEU199 GLN200 GLY201 ALA202 LYS203 LEU204 ALA205 ALA206 ALA207 LEU208 GLU209 HIS210
Unit 3 ALA2 GLU3 LEU4 ARG5 SER6 PHE7 ILE8 PHE9 ILE10 ASP11 ARG12 LEU13 GLN14 PRO15 GLN16 THR17 MET18 SER19 TYR20 LEU21 GLY22 THR23 TRP24 ILE25 LYS26 GLY27 ALA28 ASN33 MET34 ALA35 ALA36 GLN37 ILE38 ILE39 GLU40 VAL41 ALA42 PRO43 GLY44 LEU45 ASP46 ILE47 GLU48 GLY49 VAL50 THR51 ASP52 VAL53 ALA54 LEU55 LYS56 HIS57 ALA58 GLU59 VAL60 LYS61 ALA62 GLY63 ILE64 LEU65 VAL66 VAL67 GLU68 ARG69 GLN70 PHE71 GLY72 TYR73 LEU74 GLU75 PHE76 HIS77 GLY78 GLU79 THR80 GLY81 ALA82 VAL83 LYS84 ALA85 ALA86 ALA87 ASP88 ALA89 ALA90 LEU91 ASP92 TYR93 LEU94 GLY95 GLY96 ASP97 PRO98 ASP99 ALA100 ALA101 VAL102 ARG103 PRO104 GLU105 ILE106 LEU107 ALA108 SER109 ARG110 ILE111 ILE112 SER113 SER114 ILE115 ASP116 HIS117 GLN118 HIS119 ALA120 PHE121 LEU122 ILE123 ASN124 ARG125 ASN126 LYS127 ILE128 GLY129 SER130 MET131 VAL132 LEU133 PRO134 GLY135 GLU136 SER137 LEU138 PHE139 VAL140 LEU141 GLU142 VAL143 ALA144 PRO145 ALA146 SER147 TYR148 ALA149 ILE150 LEU151 ALA152 THR153 ASN154 GLU155 ALA156 GLU157 LYS158 ALA159 ALA160 ASP161 VAL162 LYS163 VAL164 VAL165 ASP166 PHE167 ARG168 MET169 ILE170 GLY171 ALA172 THR173 GLY174 ARG175 VAL176 TYR177 LEU178 SER179 GLY180 THR181 GLU182 ALA183 ASP184 VAL185 ARG186 GLN187 ALA188 ALA189 ASP190 ALA191 ALA192 ARG193 ASP194 ALA195 LEU196 ALA197 VAL198 LEU199 GLN200 GLY201
Unit 4 ALA2 GLU3 LEU4 ARG5 SER6 PHE7 ILE8 PHE9 ILE10 ASP11 ARG12 LEU13 GLN14 PRO15 GLN16 THR17 MET18 SER19 TYR20 LEU21 GLY22 THR23 TRP24 ASN33 MET34 ALA35 ALA36 GLN37 ILE38 ILE39 GLU40 VAL41 ALA42 PRO43 GLY44 LEU45 ASP46 ILE47 GLU48 GLY49 VAL50 THR51 ASP52 VAL53 ALA54 LEU55 LYS56 HIS57 ALA58 GLU59 VAL60 LYS61 ALA62 GLY63 ILE64 LEU65 VAL66 VAL67 GLU68 ARG69 GLN70 PHE71 GLY72 TYR73 LEU74 GLU75 PHE76 HIS77 GLY78 GLU79 THR80 GLY81 ALA82 VAL83 LYS84 ALA85 ALA86 ALA87 ASP88 ALA89 ALA90 LEU91 ASP92 TYR93 LEU94 GLY95 GLY96 ASP97 PRO98 ASP99 ALA100 ALA101 VAL102 ARG103 PRO104 GLU105 ILE106 LEU107 ALA108 SER109 ARG110 ILE111 ILE112 SER113 SER114 ILE115 ASP116 HIS117 GLN118 HIS119 ALA120 PHE121 LEU122 ILE123 ASN124 ARG125 ASN126 LYS127 ILE128 GLY129 SER130 MET131 VAL132 LEU133 PRO134 GLY135 GLU136 SER137 LEU138 PHE139 VAL140 LEU141 GLU142 VAL143 ALA144 PRO145 ALA146 SER147 TYR148 ALA149 ILE150 LEU151 ALA152 THR153 ASN154 GLU155 ALA156 GLU157 LYS158 ALA159 ALA160 ASP161 VAL162 LYS163 VAL164 VAL165 ASP166 PHE167 ARG168 MET169 ILE170 GLY171 ALA172 THR173 GLY174 ARG175 VAL176 TYR177 LEU178 SER179 GLY180 THR181 GLU182 ALA183 ASP184 VAL185 ARG186 GLN187 ALA188 ALA189 ASP190 ALA191 ALA192 ARG193 ASP194 ALA195 LEU196 ALA197 VAL198 LEU199 GLN200 GLY201
Unit 5 ALA2 GLU3 LEU4 ARG5 SER6 PHE7 ILE8 PHE9 ILE10 ASP11 ARG12 LEU13 GLN14 PRO15 GLN16 THR17 MET18 SER19 TYR20 LEU21 GLY22 THR23 TRP24 ILE25 LYS26 GLY27 ALA28 LEU29 PRO30 ARG31 ALA32 ASN33 MET34 ALA35 ALA36 GLN37 ILE38 ILE39 GLU40 VAL41 ALA42 PRO43 GLY44 LEU45 ASP46 ILE47 GLU48 GLY49 VAL50 THR51 ASP52 VAL53 ALA54 LEU55 LYS56 HIS57 ALA58 GLU59 VAL60 LYS61 ALA62 GLY63 ILE64 LEU65 VAL66 VAL67 GLU68 ARG69 GLN70 PHE71 GLY72 TYR73 LEU74 GLU75 PHE76 HIS77 GLY78 GLU79 THR80 GLY81 ALA82 VAL83 LYS84 ALA85 ALA86 ALA87 ASP88 ALA89 ALA90 LEU91 ASP92 TYR93 LEU94 GLY95 GLY96 ASP97 PRO98 ASP99 ALA100 ALA101 VAL102 ARG103 PRO104 GLU105 ILE106 LEU107 ALA108 SER109 ARG110 ILE111 ILE112 SER113 SER114 ILE115 ASP116 HIS117 GLN118 HIS119 ALA120 PHE121 LEU122 ILE123 ASN124 ARG125 ASN126 LYS127 ILE128 GLY129 SER130 MET131 VAL132 LEU133 PRO134 GLY135 GLU136 SER137 LEU138 PHE139 VAL140 LEU141 GLU142 VAL143 ALA144 PRO145 ALA146 SER147 TYR148 ALA149 ILE150 LEU151 ALA152 THR153 ASN154 GLU155 ALA156 GLU157 LYS158 ALA159 ALA160 ASP161 VAL162 LYS163 VAL164 VAL165 ASP166 PHE167 ARG168 MET169 ILE170 GLY171 ALA172 THR173 GLY174 ARG175 VAL176 TYR177 LEU178 SER179 GLY180 THR181 GLU182 ALA183 ASP184 VAL185 ARG186 GLN187 ALA188 ALA189 ASP190 ALA191 ALA192 ARG193 ASP194 ALA195 LEU196 ALA197 VAL198 LEU199
Unit 6 ALA2 GLU3 LEU4 ARG5 SER6 PHE7 ILE8 PHE9 ILE10 ASP11 ARG12 LEU13 GLN14 PRO15 GLN16 THR17 MET18 SER19 TYR20 LEU21 GLY22 THR23 TRP24 ILE25 LYS26 GLY27 ALA28 LEU29 PRO30 ARG31 ALA32 ASN33 MET34 ALA35 ALA36 GLN37 ILE38 ILE39 GLU40 VAL41 ALA42 PRO43 GLY44 LEU45 ASP46 ILE47 GLU48 GLY49 VAL50 THR51 ASP52 VAL53 ALA54 LEU55 LYS56 HIS57 ALA58 GLU59 VAL60 LYS61 ALA62 GLY63 ILE64 LEU65 VAL66 VAL67 GLU68 ARG69 GLN70 PHE71 GLY72 TYR73 LEU74 GLU75 PHE76 HIS77 GLY78 GLU79 THR80 GLY81 ALA82 VAL83 LYS84 ALA85 ALA86 ALA87 ASP88 ALA89 ALA90 LEU91 ASP92 TYR93 LEU94 GLY95 GLY96 ASP97 PRO98 ASP99 ALA100 ALA101 VAL102 ARG103 PRO104 GLU105 ILE106 LEU107 ALA108 SER109 ARG110 ILE111 ILE112 SER113 SER114 ILE115 ASP116 HIS117 GLN118 HIS119 ALA120 PHE121 LEU122 ILE123 ASN124 ARG125 ASN126 LYS127 ILE128 GLY129 SER130 MET131 VAL132 LEU133 PRO134 GLY135 GLU136 SER137 LEU138 PHE139 VAL140 LEU141 GLU142 VAL143 ALA144 PRO145 ALA146 SER147 TYR148 ALA149 ILE150 LEU151 ALA152 THR153 ASN154 GLU155 ALA156 GLU157 LYS158 ALA159 ALA160 ASP161 VAL162 LYS163 VAL164 VAL165 ASP166 PHE167 ARG168 MET169 ILE170 GLY171 ALA172 THR173 GLY174 ARG175 VAL176 TYR177 LEU178 SER179 GLY180 THR181 GLU182 ALA183 ASP184 VAL185 ARG186 GLN187 ALA188 ALA189 ASP190 ALA191 ALA192 ARG193 ASP194 ALA195 LEU196 ALA197 VAL198 LEU199 GLN200 GLY201 ALA202 LYS203

Ligands
Unit 7 CL301
Unit 8 CL301

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany