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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF RNA DUPLEX CONTAINING C-C BASE PAIRS OB THE PRESENCE OF HG(II)
Keywords RNA, X-RAY ANALYSIS, METALLO BASE PAIR, AG(I), HG(II)
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5AY4     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 12 230 20
2  RNA    B 12 230 20
3  Ligand    B 1 0 1
4 Water     158 0 158
total       183 460 199

Nucleic acids
Unit 1 G1 G2 A3 C4 U5 CBR6 G7 A8 C9 U10 C11 C12
Unit 2 G1 G2 A3 C4 U5 CBR6 G7 A8 C9 U10 C11 C12

Ligands
Unit 3 NA101

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany