4Y5V - Sequence, Chains, Asymmetric and Biological Units

• Title: DIABODY 305 COMPLEX WITH EPOR
• Keywords: DIABODY COMPLEX, RECEPTOR, PROTEIN BINDING-IMMUNE SYSTEM COM
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4Y5V	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	DIABODY 305 VH DOMAIN	A	121	917	0
2	Protein	DIABODY 305 VL DOMAIN	B	111	821	0
3	Protein	ERYTHROPOIETIN RECEPTOR	C	206	1599	0
4	Protein	DIABODY 305 VH DOMAIN	D	122	921	0
5	Protein	DIABODY 305 VL DOMAIN	E	112	822	0
6	Protein	ERYTHROPOIETIN RECEPTOR	F	206	1592	0
7	Protein	DIABODY 305 VH DOMAIN	G	119	909	0
8	Protein	DIABODY 305 VL DOMAIN	H	112	826	0
9	Protein	ERYTHROPOIETIN RECEPTOR	I	191	1444	0
10	Ligand	DIABODY 305 VH DOMAIN	A	1	0	6
11	Ligand	DIABODY 305 VL DOMAIN	B	3	0	18
12	Ligand	DIABODY 305 VH DOMAIN	D	4	0	29
13	Ligand	DIABODY 305 VL DOMAIN	E	3	0	18
14	Ligand	ERYTHROPOIETIN RECEPTOR	F	1	0	6
15	Ligand	DIABODY 305 VH DOMAIN	G	2	0	12
16	Ligand	DIABODY 305 VL DOMAIN	H	3	0	18
17	Water			301	0	301
total				1618	9851	408

Proteins

Unit 1	SER 0 GLU 1 VAL 2 GLN 3 LEU 4 VAL 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 THR 28 PHE 29 SER 30 SER 31 TYR 32 TRP 33 MET 34 SER 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 VAL 48 ALA 49 ASN 50 ILE 51 LYS 52 PRO 53 ASP 54 GLY 55 SER 56 GLU 57 LYS 58 TYR 59 TYR 60 VAL 61 ASP 62 SER 63 VAL 64 LYS 65 GLY 66 ARG 67 PHE 68 THR 69 ILE 70 SER 71 ARG 72 ASP 73 ASN 74 ALA 75 LYS 76 ASN 77 SER 78 VAL 79 TYR 80 LEU 81 GLN 82 MET 83 ASN 84 SER 85 LEU 86 ARG 87 ALA 88 GLU 89 ASP 90 THR 91 ALA 92 VAL 93 TYR 94 TYR 95 CYS 96 ALA 97 ARG 98 VAL 99 SER 100 ARG 101 GLY 102 GLY 103 SER 104 TYR 105 SER 106 ASP 107 TRP 108 GLY 109 GLN 110 GLY 111 THR 112 LEU 113 VAL 114 THR 115 VAL 116 SER 117 SER 118 GLY 119 GLY 120
Unit 2	SER 0 GLN 1 SER 2 ALA 3 LEU 4 THR 5 GLN 6 PRO 7 ALA 8 SER 9 VAL 10 SER 11 GLY 12 SER 13 PRO 14 GLY 15 GLN 16 SER 17 ILE 18 THR 19 ILE 20 SER 21 CYS 22 THR 23 GLY 24 THR 25 SER 26 SER 27 ASP 28 VAL 29 GLY 30 GLY 31 TYR 32 ILE 33 TYR 34 VAL 35 SER 36 TRP 37 TYR 38 GLN 39 GLN 40 HIS 41 PRO 42 GLY 43 LYS 44 ALA 45 PRO 46 LYS 47 LEU 48 MET 49 ILE 50 TYR 51 ASP 52 VAL 53 SER 54 ARG 55 ARG 56 PRO 57 SER 58 GLY 59 ILE 60 SER 61 ASP 62 ARG 63 PHE 64 SER 65 GLY 66 SER 67 LYS 68 SER 69 GLY 70 ASN 71 THR 72 ALA 73 SER 74 LEU 75 THR 76 ILE 77 SER 78 GLY 79 LEU 80 GLN 81 ALA 82 GLU 83 ASP 84 GLU 85 ALA 86 ASP 87 TYR 88 TYR 89 CYS 90 ASN 91 SER 92 TYR 93 THR 94 THR 95 LEU 96 SER 97 THR 98 TRP 99 LEU 100 PHE 101 GLY 102 GLY 103 GLY 104 THR 105 LYS 106 VAL 107 THR 108 VAL 109 LEU 110
Unit 3	PRO 9 LYS 10 PHE 11 GLU 12 SER 13 LYS 14 ALA 15 ALA 16 LEU 17 LEU 18 ALA 19 ALA 20 ARG 21 GLY 22 PRO 23 GLU 24 GLU 25 LEU 26 LEU 27 CYS 28 PHE 29 THR 30 GLU 31 ARG 32 LEU 33 GLU 34 ASP 35 LEU 36 VAL 37 CYS 38 PHE 39 TRP 40 GLU 41 GLU 42 ALA 43 PRO 50 GLY 51 GLN 52 TYR 53 SER 54 PHE 55 SER 56 TYR 57 GLN 58 LEU 59 GLU 60 ASP 61 GLU 62 PRO 63 TRP 64 LYS 65 LEU 66 CYS 67 ARG 68 LEU 69 HIS 70 GLN 71 ALA 72 PRO 73 THR 74 ALA 75 GLY 77 ALA 78 VAL 79 ARG 80 PHE 81 TRP 82 CYS 83 SER 84 LEU 85 PRO 86 THR 87 ALA 88 ASP 89 THR 90 SER 91 SER 92 PHE 93 VAL 94 PRO 95 LEU 96 GLU 97 LEU 98 ARG 99 VAL 100 THR 101 ALA 102 ALA 103 SER 104 GLY 105 ALA 106 PRO 107 ARG 108 TYR 109 HIS 110 ARG 111 VAL 112 ILE 113 HIS 114 ILE 115 ASN 116 GLU 117 VAL 118 VAL 119 LEU 120 LEU 121 ASP 122 ALA 123 PRO 124 VAL 125 GLY 126 LEU 127 VAL 128 ALA 129 ARG 130 LEU 131 ALA 132 ASP 133 GLU 134 SER 135 GLY 136 HIS 137 VAL 138 VAL 139 LEU 140 ARG 141 TRP 142 LEU 143 PRO 144 PRO 145 PRO 146 GLU 147 THR 148 PRO 149 MET 150 THR 151 SER 152 HIS 153 ILE 154 ARG 155 TYR 156 GLU 157 VAL 158 ASP 159 VAL 160 SER 161 ALA 162 GLY 163 GLN 164 GLY 165 SER 168 VAL 169 GLN 170 ARG 171 VAL 172 GLU 173 ILE 174 LEU 175 GLU 176 GLY 177 ARG 178 THR 179 GLU 180 CYS 181 VAL 182 LEU 183 SER 184 ASN 185 LEU 186 ARG 187 GLY 188 ARG 189 THR 190 ARG 191 TYR 192 THR 193 PHE 194 ALA 195 VAL 196 ARG 197 ALA 198 ARG 199 MET 200 ALA 201 GLU 202 PRO 203 SER 204 PHE 205 GLY 206 GLY 207 PHE 208 TRP 209 SER 210 ALA 211 TRP 212 SER 213 GLU 214 PRO 215 VAL 216 SER 217 LEU 218 LEU 219 THR 220 PRO 221 SER 222 ASP 223
Unit 4	SER 0 GLU 1 VAL 2 GLN 3 LEU 4 VAL 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 THR 28 PHE 29 SER 30 SER 31 TYR 32 TRP 33 MET 34 SER 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 VAL 48 ALA 49 ASN 50 ILE 51 LYS 52 PRO 53 ASP 54 GLY 55 SER 56 GLU 57 LYS 58 TYR 59 TYR 60 VAL 61 ASP 62 SER 63 VAL 64 LYS 65 GLY 66 ARG 67 PHE 68 THR 69 ILE 70 SER 71 ARG 72 ASP 73 ASN 74 ALA 75 LYS 76 ASN 77 SER 78 VAL 79 TYR 80 LEU 81 GLN 82 MET 83 ASN 84 SER 85 LEU 86 ARG 87 ALA 88 GLU 89 ASP 90 THR 91 ALA 92 VAL 93 TYR 94 TYR 95 CYS 96 ALA 97 ARG 98 VAL 99 SER 100 ARG 101 GLY 102 GLY 103 SER 104 TYR 105 SER 106 ASP 107 TRP 108 GLY 109 GLN 110 GLY 111 THR 112 LEU 113 VAL 114 THR 115 VAL 116 SER 117 SER 118 GLY 119 GLY 120 GLY 121
Unit 5	SER 0 GLN 1 SER 2 ALA 3 LEU 4 THR 5 GLN 6 PRO 7 ALA 8 SER 9 VAL 10 SER 11 GLY 12 SER 13 PRO 14 GLY 15 GLN 16 SER 17 ILE 18 THR 19 ILE 20 SER 21 CYS 22 THR 23 GLY 24 THR 25 SER 26 SER 27 ASP 28 VAL 29 GLY 30 GLY 31 TYR 32 ILE 33 TYR 34 VAL 35 SER 36 TRP 37 TYR 38 GLN 39 GLN 40 HIS 41 PRO 42 GLY 43 LYS 44 ALA 45 PRO 46 LYS 47 LEU 48 MET 49 ILE 50 TYR 51 ASP 52 VAL 53 SER 54 ARG 55 ARG 56 PRO 57 SER 58 GLY 59 ILE 60 SER 61 ASP 62 ARG 63 PHE 64 SER 65 GLY 66 SER 67 LYS 68 SER 69 GLY 70 ASN 71 THR 72 ALA 73 SER 74 LEU 75 THR 76 ILE 77 SER 78 GLY 79 LEU 80 GLN 81 ALA 82 GLU 83 ASP 84 GLU 85 ALA 86 ASP 87 TYR 88 TYR 89 CYS 90 ASN 91 SER 92 TYR 93 THR 94 THR 95 LEU 96 SER 97 THR 98 TRP 99 LEU 100 PHE 101 GLY 102 GLY 103 GLY 104 THR 105 LYS 106 VAL 107 THR 108 VAL 109 LEU 110 ALA 111
Unit 6	PRO 9 LYS 10 PHE 11 GLU 12 SER 13 LYS 14 ALA 15 ALA 16 LEU 17 LEU 18 ALA 19 ALA 20 ARG 21 GLY 22 PRO 23 GLU 24 GLU 25 LEU 26 LEU 27 CYS 28 PHE 29 THR 30 GLU 31 ARG 32 LEU 33 GLU 34 ASP 35 LEU 36 VAL 37 CYS 38 PHE 39 TRP 40 GLU 41 GLU 42 ALA 43 ALA 44 PRO 50 GLY 51 GLN 52 TYR 53 SER 54 PHE 55 SER 56 TYR 57 GLN 58 LEU 59 GLU 60 ASP 61 GLU 62 PRO 63 TRP 64 LYS 65 LEU 66 CYS 67 ARG 68 LEU 69 HIS 70 GLN 71 ALA 72 PRO 73 THR 74 ALA 75 ARG 76 GLY 77 ALA 78 VAL 79 ARG 80 PHE 81 TRP 82 CYS 83 SER 84 LEU 85 PRO 86 THR 87 ALA 88 ASP 89 THR 90 SER 91 SER 92 PHE 93 VAL 94 PRO 95 LEU 96 GLU 97 LEU 98 ARG 99 VAL 100 THR 101 ALA 102 ALA 103 SER 104 GLY 105 ALA 106 PRO 107 ARG 108 TYR 109 HIS 110 ARG 111 VAL 112 ILE 113 HIS 114 ILE 115 ASN 116 GLU 117 VAL 118 VAL 119 LEU 120 LEU 121 ASP 122 ALA 123 PRO 124 VAL 125 GLY 126 LEU 127 VAL 128 ALA 129 ARG 130 LEU 131 ALA 132 GLU 134 SER 135 GLY 136 HIS 137 VAL 138 VAL 139 LEU 140 ARG 141 TRP 142 LEU 143 PRO 144 PRO 145 PRO 146 GLU 147 THR 148 PRO 149 MET 150 THR 151 SER 152 HIS 153 ILE 154 ARG 155 TYR 156 GLU 157 VAL 158 ASP 159 VAL 160 SER 161 ALA 162 GLY 163 GLN 164 SER 168 VAL 169 GLN 170 ARG 171 VAL 172 GLU 173 ILE 174 LEU 175 GLU 176 GLY 177 ARG 178 THR 179 GLU 180 CYS 181 VAL 182 LEU 183 SER 184 ASN 185 LEU 186 ARG 187 GLY 188 ARG 189 THR 190 ARG 191 TYR 192 THR 193 PHE 194 ALA 195 VAL 196 ARG 197 ALA 198 ARG 199 MET 200 ALA 201 GLU 202 PRO 203 SER 204 PHE 205 GLY 206 GLY 207 PHE 208 TRP 209 SER 210 ALA 211 TRP 212 SER 213 GLU 214 PRO 215 VAL 216 SER 217 LEU 218 LEU 219 THR 220 PRO 221 SER 222 ASP 223
Unit 7	SER 0 GLU 1 VAL 2 GLN 3 LEU 4 VAL 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 THR 28 PHE 29 SER 30 SER 31 TYR 32 TRP 33 MET 34 SER 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 VAL 48 ALA 49 ASN 50 ILE 51 LYS 52 PRO 53 ASP 54 GLY 55 SER 56 GLU 57 LYS 58 TYR 59 TYR 60 VAL 61 ASP 62 SER 63 VAL 64 LYS 65 GLY 66 ARG 67 PHE 68 THR 69 ILE 70 SER 71 ARG 72 ASP 73 ASN 74 ALA 75 LYS 76 ASN 77 SER 78 VAL 79 TYR 80 LEU 81 GLN 82 MET 83 ASN 84 SER 85 LEU 86 ARG 87 ALA 88 GLU 89 ASP 90 THR 91 ALA 92 VAL 93 TYR 94 TYR 95 CYS 96 ALA 97 ARG 98 VAL 99 SER 100 ARG 101 GLY 102 GLY 103 SER 104 TYR 105 SER 106 ASP 107 TRP 108 GLY 109 GLN 110 GLY 111 THR 112 LEU 113 VAL 114 THR 115 VAL 116 SER 117 SER 118
Unit 8	SER 0 GLN 1 SER 2 ALA 3 LEU 4 THR 5 GLN 6 PRO 7 ALA 8 SER 9 VAL 10 SER 11 GLY 12 SER 13 PRO 14 GLY 15 GLN 16 SER 17 ILE 18 THR 19 ILE 20 SER 21 CYS 22 THR 23 GLY 24 THR 25 SER 26 SER 27 ASP 28 VAL 29 GLY 30 GLY 31 TYR 32 ILE 33 TYR 34 VAL 35 SER 36 TRP 37 TYR 38 GLN 39 GLN 40 HIS 41 PRO 42 GLY 43 LYS 44 ALA 45 PRO 46 LYS 47 LEU 48 MET 49 ILE 50 TYR 51 ASP 52 VAL 53 SER 54 ARG 55 ARG 56 PRO 57 SER 58 GLY 59 ILE 60 SER 61 ASP 62 ARG 63 PHE 64 SER 65 GLY 66 SER 67 LYS 68 SER 69 GLY 70 ASN 71 THR 72 ALA 73 SER 74 LEU 75 THR 76 ILE 77 SER 78 GLY 79 LEU 80 GLN 81 ALA 82 GLU 83 ASP 84 GLU 85 ALA 86 ASP 87 TYR 88 TYR 89 CYS 90 ASN 91 SER 92 TYR 93 THR 94 THR 95 LEU 96 SER 97 THR 98 TRP 99 LEU 100 PHE 101 GLY 102 GLY 103 GLY 104 THR 105 LYS 106 VAL 107 THR 108 VAL 109 LEU 110 ALA 111
Unit 9	LYS 10 PHE 11 GLU 12 SER 13 LYS 14 ALA 15 ALA 16 LEU 17 LEU 18 ALA 19 ALA 20 ARG 21 GLY 22 PRO 23 GLU 24 GLU 25 LEU 26 LEU 27 CYS 28 PHE 29 THR 30 GLU 31 ARG 32 LEU 33 GLU 34 ASP 35 LEU 36 VAL 37 CYS 38 PHE 39 TRP 40 GLU 41 GLU 42 ALA 43 ALA 44 PRO 50 GLY 51 GLN 52 TYR 53 SER 54 PHE 55 SER 56 TYR 57 GLN 58 LEU 59 GLU 60 ASP 61 GLU 62 PRO 63 TRP 64 LYS 65 LEU 66 CYS 67 ARG 68 LEU 69 HIS 70 GLN 71 ALA 72 PRO 73 THR 74 ALA 78 VAL 79 ARG 80 PHE 81 TRP 82 CYS 83 SER 84 LEU 85 PRO 86 THR 87 ALA 88 ASP 89 THR 90 SER 91 SER 92 PHE 93 VAL 94 PRO 95 LEU 96 GLU 97 LEU 98 ARG 99 VAL 100 THR 101 ALA 102 ALA 103 SER 104 GLY 105 ALA 106 PRO 107 ARG 108 TYR 109 HIS 110 ARG 111 VAL 112 ILE 113 HIS 114 ILE 115 ASN 116 GLU 117 VAL 118 VAL 119 LEU 120 LEU 121 ASP 122 ALA 123 PRO 124 VAL 125 GLY 126 LEU 127 VAL 128 ALA 129 ARG 130 LEU 131 SER 135 GLY 136 HIS 137 VAL 138 VAL 139 LEU 140 ARG 141 TRP 142 LEU 143 PRO 144 PRO 145 PRO 146 GLU 147 THR 148 PRO 149 MET 150 THR 151 SER 152 HIS 153 ILE 154 ARG 155 TYR 156 GLU 157 VAL 158 ASP 159 VAL 160 SER 161 ALA 162 VAL 169 GLN 170 ARG 171 VAL 172 GLU 173 ILE 174 LEU 175 GLU 176 GLY 177 ARG 178 THR 179 GLU 180 CYS 181 VAL 182 LEU 183 SER 184 ASN 185 GLY 188 ARG 189 THR 190 ARG 191 TYR 192 THR 193 PHE 194 ALA 195 VAL 196 ARG 197 ALA 198 ARG 199 MET 200 ALA 201 GLU 202 PRO 203 SER 204 PHE 205 GLY 206 GLY 207 PHE 208 TRP 209 SER 210 ALA 211 TRP 212 SER 213 GLU 214 PRO 215 VAL 216 SER 217 LEU 218 LEU 219

Ligands

Unit 10	GOL 201
Unit 11	GOL 201 GOL 202 GOL 203
Unit 12	GOL 201 GOL 202 PGE 203 PEG 204
Unit 13	GOL 201 GOL 202 GOL 203
Unit 14	GOL 301
Unit 15	GOL 201 GOL 202
Unit 16	GOL 201 GOL 202 GOL 203